Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2171

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,483,432	-				-2.2
2,483,438	+				+0.7
2,483,439	-				+1.4
2,483,439	-				+1.4
2,483,439	-				+2.1
2,483,452	+				+1.0
2,483,452	+				-0.6
2,483,452	+				-0.6
2,483,452	+				+1.5
2,483,453	-				+1.4
2,483,453	-				-0.2
2,483,453	-				-0.1
2,483,453	-				-0.5
2,483,456	+				-0.6
2,483,456	+				+1.4
2,483,456	+				-0.2
2,483,456	+				+0.4
2,483,456	+				+0.0
2,483,456	+				-0.2
2,483,456	+				+0.8
2,483,456	+				+0.8
2,483,456	+				+1.4
2,483,456	+				+0.5
2,483,456	+				+0.3
2,483,456	+				+1.0
2,483,457	-				+0.8
2,483,457	-				+0.2
2,483,457	-				+1.8
2,483,457	-				+1.4
2,483,457	-				-1.2
2,483,457	-				-0.2
2,483,457	-				+0.9
2,483,457	-				+0.9
2,483,457	-				+2.1
2,483,457	-				-1.1
2,483,457	-				-0.6
2,483,553	+				-0.6
2,483,553	+				+0.4
2,483,553	+				+1.4
2,483,553	+				+0.4
2,483,554	-				+0.2
2,483,554	-				+0.0
2,483,554	-				+0.6
2,483,554	-				-0.6
2,483,554	-				+2.2
2,483,554	-				-0.2
2,483,554	-				-0.8
2,483,558	+				-0.4
2,483,558	+				-0.2
2,483,558	+				+0.6
2,483,559	-				-0.9
2,483,559	-				-0.2
2,483,569	+				+0.4
2,483,569	+				-2.1
2,483,569	+				-1.4
2,483,570	-				-0.2
2,483,570	-				-1.0
2,483,570	-				-1.1
2,483,570	-				+0.4
2,483,570	-				+0.6
2,483,570	-				-1.4
2,483,570	-				-0.6
2,483,577	+				+0.2
2,483,578	-				-0.5
2,483,623	-				+0.1
2,483,623	-				-0.9
2,483,623	-				-2.2
2,483,623	-				-0.0
2,483,629	+				-1.3
2,483,629	+				+0.8
2,483,630	-				-2.3
2,483,630	-				-0.6
2,483,668	+				+1.4
2,483,705	+		Pf1N1B4_2170	0.12	-1.0
2,483,706	-		Pf1N1B4_2170	0.12	-0.1
2,483,788	+		Pf1N1B4_2170	0.24	+0.4
2,483,789	-		Pf1N1B4_2170	0.24	-0.2
2,483,789	-		Pf1N1B4_2170	0.24	-0.2
2,483,789	-		Pf1N1B4_2170	0.24	+0.0
2,483,789	-		Pf1N1B4_2170	0.24	+1.4
2,483,899	-		Pf1N1B4_2170	0.40	+1.1
2,483,951	+		Pf1N1B4_2170	0.47	+0.1
2,483,952	-		Pf1N1B4_2170	0.47	+0.2
2,483,952	-		Pf1N1B4_2170	0.47	+0.7
2,483,958	+		Pf1N1B4_2170	0.48	+1.1
2,483,958	+		Pf1N1B4_2170	0.48	+0.4
2,484,070	+		Pf1N1B4_2170	0.64	-0.2
2,484,070	+		Pf1N1B4_2170	0.64	-1.0
2,484,071	-		Pf1N1B4_2170	0.64	-1.4
2,484,071	-		Pf1N1B4_2170	0.64	+0.5
2,484,071	-		Pf1N1B4_2170	0.64	+1.6
2,484,071	-		Pf1N1B4_2170	0.64	-0.7
2,484,071	-		Pf1N1B4_2170	0.64	+0.4
2,484,336	+				+0.5
2,484,368	+				+0.1
2,484,368	+				-0.6
2,484,368	+				-0.7
2,484,404	+				+0.6
2,484,404	+				-0.8
2,484,404	+				-0.2
2,484,404	+				-0.6
2,484,404	+				+2.7
2,484,405	-				-1.0
2,484,405	-				+0.6
2,484,405	-				-1.4
2,484,797	+		Pf1N1B4_2171	0.53	-1.6
2,484,798	-		Pf1N1B4_2171	0.53	+1.4
2,484,798	-		Pf1N1B4_2171	0.53	-1.2
2,484,967	+		Pf1N1B4_2171	0.72	+0.6
2,484,967	+		Pf1N1B4_2171	0.72	-0.6
2,484,967	+		Pf1N1B4_2171	0.72	-1.2
2,484,967	+		Pf1N1B4_2171	0.72	-1.0
2,484,977	+		Pf1N1B4_2171	0.73	-2.6
2,484,977	+		Pf1N1B4_2171	0.73	+1.4
2,484,978	-		Pf1N1B4_2171	0.73	+0.0
2,485,148	+				+0.4
2,485,227	+				-2.2
2,485,286	-				+0.1
2,485,286	-				-0.8
2,485,286	-				+0.8
2,485,286	-				+0.1
2,485,286	-				-0.2
2,485,318	+		Pf1N1B4_2172	0.13	-0.4
2,485,318	+		Pf1N1B4_2172	0.13	-2.0
2,485,318	+		Pf1N1B4_2172	0.13	+0.8
2,485,318	+		Pf1N1B4_2172	0.13	-1.0
2,485,319	-				+2.4
2,485,319	-		Pf1N1B4_2172	0.13	-1.1
2,485,319	-		Pf1N1B4_2172	0.13	-0.9
2,485,319	-		Pf1N1B4_2172	0.13	+0.9
2,485,626	+		Pf1N1B4_2172	0.56	+0.6
2,485,626	+		Pf1N1B4_2172	0.56	-1.6
2,485,627	-		Pf1N1B4_2172	0.56	+0.2
2,485,627	-		Pf1N1B4_2172	0.56	-0.0
2,485,627	-		Pf1N1B4_2172	0.56	+0.2
2,485,821	+		Pf1N1B4_2172	0.83	-1.6
2,485,821	+		Pf1N1B4_2172	0.83	+0.1
2,485,821	+		Pf1N1B4_2172	0.83	-1.8
2,485,822	-		Pf1N1B4_2172	0.83	-1.5
2,485,822	-		Pf1N1B4_2172	0.83	+0.8
2,485,822	-		Pf1N1B4_2172	0.83	+0.4
2,485,918	-				-1.1
2,485,982	+				-1.8
2,485,982	+				-1.2
2,485,982	+				+1.0
2,485,982	+				-1.4
2,485,983	-				+0.4
2,485,983	-				-1.8
2,485,983	-				+2.9
2,486,071	+		Pf1N1B4_2173	0.13	-1.2