Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2009

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,293,212	+		Pf1N1B4_2008	0.32	+0.6
2,293,212	+		Pf1N1B4_2008	0.32	+0.3
2,293,213	-		Pf1N1B4_2008	0.32	+1.1
2,293,244	+		Pf1N1B4_2008	0.36	-1.2
2,293,244	+		Pf1N1B4_2008	0.36	-0.6
2,293,244	+		Pf1N1B4_2008	0.36	-1.6
2,293,244	+		Pf1N1B4_2008	0.36	+0.5
2,293,244	+		Pf1N1B4_2008	0.36	-0.6
2,293,244	+		Pf1N1B4_2008	0.36	-0.1
2,293,244	+		Pf1N1B4_2008	0.36	-1.1
2,293,244	+		Pf1N1B4_2008	0.36	+0.8
2,293,244	+		Pf1N1B4_2008	0.36	+0.9
2,293,244	+		Pf1N1B4_2008	0.36	-0.2
2,293,244	+		Pf1N1B4_2008	0.36	+0.8
2,293,245	-		Pf1N1B4_2008	0.36	-0.9
2,293,245	-		Pf1N1B4_2008	0.36	+0.2
2,293,245	-		Pf1N1B4_2008	0.36	-0.8
2,293,245	-		Pf1N1B4_2008	0.36	+0.4
2,293,245	-		Pf1N1B4_2008	0.36	-0.3
2,293,245	-		Pf1N1B4_2008	0.36	+0.1
2,293,245	-		Pf1N1B4_2008	0.36	+2.0
2,293,332	+		Pf1N1B4_2008	0.46	+0.5
2,293,332	+		Pf1N1B4_2008	0.46	-0.3
2,293,332	+		Pf1N1B4_2008	0.46	-0.6
2,293,332	+		Pf1N1B4_2008	0.46	+0.1
2,293,332	+		Pf1N1B4_2008	0.46	+0.9
2,293,332	+		Pf1N1B4_2008	0.46	+1.1
2,293,332	+		Pf1N1B4_2008	0.46	+0.3
2,293,333	-		Pf1N1B4_2008	0.46	+0.5
2,293,333	-		Pf1N1B4_2008	0.46	+0.1
2,293,333	-		Pf1N1B4_2008	0.46	-0.9
2,293,333	-		Pf1N1B4_2008	0.46	+1.2
2,293,333	-		Pf1N1B4_2008	0.46	-1.2
2,293,333	-		Pf1N1B4_2008	0.46	+0.6
2,293,390	+		Pf1N1B4_2008	0.53	-1.1
2,293,390	+		Pf1N1B4_2008	0.53	+1.4
2,293,390	+		Pf1N1B4_2008	0.53	-0.3
2,293,410	+		Pf1N1B4_2008	0.55	-1.2
2,293,411	-		Pf1N1B4_2008	0.55	-0.3
2,293,475	+		Pf1N1B4_2008	0.63	+0.5
2,293,475	+		Pf1N1B4_2008	0.63	-0.8
2,293,475	+		Pf1N1B4_2008	0.63	-0.9
2,293,475	+		Pf1N1B4_2008	0.63	-0.5
2,293,475	+		Pf1N1B4_2008	0.63	+1.2
2,293,475	+		Pf1N1B4_2008	0.63	+0.4
2,293,475	+		Pf1N1B4_2008	0.63	-1.1
2,293,476	-		Pf1N1B4_2008	0.63	+0.4
2,293,476	-		Pf1N1B4_2008	0.63	+1.4
2,293,476	-		Pf1N1B4_2008	0.63	+1.1
2,293,632	+		Pf1N1B4_2008	0.81	+0.9
2,293,632	+		Pf1N1B4_2008	0.81	-0.3
2,293,632	+		Pf1N1B4_2008	0.81	+0.3
2,293,632	+		Pf1N1B4_2008	0.81	+0.1
2,293,632	+		Pf1N1B4_2008	0.81	+0.7
2,293,632	+		Pf1N1B4_2008	0.81	-0.9
2,293,632	+		Pf1N1B4_2008	0.81	-0.8
2,293,632	+		Pf1N1B4_2008	0.81	+0.7
2,293,632	+		Pf1N1B4_2008	0.81	+1.7
2,293,633	-		Pf1N1B4_2008	0.81	+0.6
2,293,633	-		Pf1N1B4_2008	0.81	-1.1
2,293,633	-				+1.4
2,293,633	-		Pf1N1B4_2008	0.81	+0.0
2,293,633	-		Pf1N1B4_2008	0.81	-0.6
2,293,634	+		Pf1N1B4_2008	0.81	-1.1
2,293,635	-		Pf1N1B4_2008	0.81	-1.9
2,293,666	+		Pf1N1B4_2008	0.85	-1.4
2,293,946	-				-0.6
2,293,946	-				-0.2
2,293,946	-				+0.4
2,294,014	+				+0.1
2,294,014	+				+0.2
2,294,014	+				+0.1
2,294,014	+				+0.2
2,294,014	+				+0.1
2,294,014	+				-0.8
2,294,014	+				+0.7
2,294,014	+				-1.2
2,294,015	-				+0.1
2,294,015	-				-0.3
2,294,015	-				+1.4
2,294,015	-				+2.1
2,294,015	-				+0.4
2,294,015	-				+0.4
2,294,015	-				-0.9
2,294,015	-				-1.6
2,294,015	-				-1.3
2,294,021	+				-0.6
2,294,021	+				+0.0
2,294,021	+				-0.7
2,294,021	+				+0.6
2,294,021	+				+2.4
2,294,021	+				+1.3
2,294,021	+				-1.6
2,294,021	+				-0.1
2,294,021	+				-0.8
2,294,022	-				+1.0
2,294,022	-				+1.0
2,294,022	-				-0.5
2,294,022	-				-0.2
2,294,022	-				+1.8
2,294,031	-				+1.4
2,294,167	+				-0.2
2,294,211	+				+0.6
2,294,212	-				+0.7
2,294,458	+		Pf1N1B4_2009	0.27	-0.5
2,294,459	-		Pf1N1B4_2009	0.27	-0.8
2,294,459	-		Pf1N1B4_2009	0.27	+0.4
2,294,531	+		Pf1N1B4_2009	0.35	-1.9
2,294,532	-		Pf1N1B4_2009	0.35	+0.9
2,294,532	-		Pf1N1B4_2009	0.35	-2.1
2,294,532	-		Pf1N1B4_2009	0.35	-2.2
2,294,532	-		Pf1N1B4_2009	0.35	+0.0
2,294,585	+		Pf1N1B4_2009	0.40	-0.6
2,294,586	-		Pf1N1B4_2009	0.40	-1.9
2,294,840	+		Pf1N1B4_2009	0.67	-0.6
2,294,840	+		Pf1N1B4_2009	0.67	-1.2
2,294,840	+		Pf1N1B4_2009	0.67	+0.7
2,294,841	-		Pf1N1B4_2009	0.67	+2.0
2,294,841	-		Pf1N1B4_2009	0.67	-1.2
2,294,981	+		Pf1N1B4_2009	0.82	+0.1
2,294,982	-		Pf1N1B4_2009	0.82	-0.9
2,294,999	+		Pf1N1B4_2009	0.84	+0.4
2,294,999	+		Pf1N1B4_2009	0.84	-0.6
2,294,999	+		Pf1N1B4_2009	0.84	-0.9
2,294,999	+		Pf1N1B4_2009	0.84	-0.2
2,295,000	-		Pf1N1B4_2009	0.84	+1.7
2,295,000	-				+1.4
2,295,000	-		Pf1N1B4_2009	0.84	-0.1
2,295,000	-		Pf1N1B4_2009	0.84	-0.2
2,295,096	-				-1.4
2,295,104	-				-1.4
2,295,104	-				+1.4
2,295,104	-				+1.4
2,295,104	-				-1.2
2,295,268	-				+0.4
2,295,364	-				+2.1
2,295,453	-				+2.0
2,295,453	-				-1.2
2,295,453	-				-0.1
2,295,453	-				-0.9
2,295,738	+		Pf1N1B4_2010	0.27	+0.2
2,296,115	+		Pf1N1B4_2010	0.53	+1.1
2,296,116	-		Pf1N1B4_2010	0.53	+0.9
2,296,116	-		Pf1N1B4_2010	0.53	+2.2
2,296,116	-		Pf1N1B4_2010	0.53	-0.6