Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1426

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,633,159	+				-0.3
1,633,159	+				-0.6
1,633,160	-				-1.0
1,633,212	+				-1.2
1,633,318	+				+2.3
1,633,318	+				-0.5
1,633,318	+				-0.5
1,633,318	+				-1.3
1,633,319	-				+1.3
1,633,319	-				-1.0
1,633,319	-				-0.9
1,633,319	-				+0.7
1,633,319	-				-0.0
1,633,319	-				+0.5
1,633,319	-				+0.0
1,633,330	+				+2.3
1,633,366	+				-1.5
1,633,370	-				-1.3
1,633,553	+		Pf1N1B4_1425	0.24	+0.9
1,633,554	-		Pf1N1B4_1425	0.24	+1.0
1,633,569	+		Pf1N1B4_1425	0.26	-0.4
1,633,569	+		Pf1N1B4_1425	0.26	+0.2
1,633,569	+		Pf1N1B4_1425	0.26	-0.3
1,633,570	-		Pf1N1B4_1425	0.26	+0.3
1,633,570	-		Pf1N1B4_1425	0.26	-0.0
1,633,570	-		Pf1N1B4_1425	0.26	+0.6
1,633,570	-		Pf1N1B4_1425	0.26	-0.7
1,633,647	-		Pf1N1B4_1425	0.38	-0.9
1,633,738	+		Pf1N1B4_1425	0.51	+1.6
1,633,738	+		Pf1N1B4_1425	0.51	+1.0
1,633,739	-		Pf1N1B4_1425	0.51	+0.3
1,633,739	-		Pf1N1B4_1425	0.51	-0.5
1,633,739	-		Pf1N1B4_1425	0.51	-0.6
1,633,739	-		Pf1N1B4_1425	0.51	+0.3
1,633,739	-		Pf1N1B4_1425	0.51	+1.5
1,633,739	-		Pf1N1B4_1425	0.51	+0.2
1,633,739	-		Pf1N1B4_1425	0.51	+2.0
1,633,739	-		Pf1N1B4_1425	0.51	-0.8
1,633,739	-		Pf1N1B4_1425	0.51	-0.5
1,633,741	+		Pf1N1B4_1425	0.51	+1.3
1,633,741	+		Pf1N1B4_1425	0.51	-0.3
1,633,741	+		Pf1N1B4_1425	0.51	+1.7
1,633,741	+		Pf1N1B4_1425	0.51	-0.0
1,633,742	-		Pf1N1B4_1425	0.52	+2.2
1,633,901	-		Pf1N1B4_1425	0.75	+1.3
1,634,101	+				+0.9
1,634,101	+				+0.3
1,634,101	+				-0.0
1,634,101	+				-1.0
1,634,101	+				-1.3
1,634,102	-				-2.0
1,634,102	-				-0.3
1,634,102	-				-1.4
1,634,102	-				-0.3
1,634,102	-				+1.3
1,634,102	-				-1.0
1,634,105	+				-0.9
1,634,105	+				-0.2
1,634,106	-				+1.1
1,634,106	-				+0.3
1,634,106	-				+1.3
1,634,106	-				+1.6
1,634,114	-				+1.3
1,634,125	+				+0.3
1,634,126	-				-1.3
1,634,126	-				+1.3
1,634,152	-				-0.7
1,634,254	+				-1.9
1,634,254	+				+0.3
1,634,266	+		Pf1N1B4_1426	0.10	-0.6
1,634,266	+		Pf1N1B4_1426	0.10	+1.8
1,634,266	+		Pf1N1B4_1426	0.10	+0.1
1,634,266	+		Pf1N1B4_1426	0.10	+0.2
1,634,268	+		Pf1N1B4_1426	0.10	-1.4
1,634,280	+		Pf1N1B4_1426	0.11	+0.3
1,634,331	+		Pf1N1B4_1426	0.16	-0.0
1,634,579	+		Pf1N1B4_1426	0.37	+1.9
1,634,605	+		Pf1N1B4_1426	0.40	+2.0
1,634,613	+		Pf1N1B4_1426	0.40	+1.6
1,634,752	+		Pf1N1B4_1426	0.52	+1.6
1,634,821	+		Pf1N1B4_1426	0.58	+1.3
1,634,877	+		Pf1N1B4_1426	0.63	+0.6
1,634,877	+		Pf1N1B4_1426	0.63	-1.5
1,634,877	+		Pf1N1B4_1426	0.63	+0.3
1,634,880	+				-1.3
1,634,973	+		Pf1N1B4_1426	0.72	-2.5
1,634,973	+				+0.7
1,635,058	+		Pf1N1B4_1426	0.79	+1.3
1,635,058	+		Pf1N1B4_1426	0.79	+0.7
1,635,233	+				+0.1
1,635,233	+				+3.6
1,635,233	+				-0.5
1,635,233	+				-0.4
1,635,233	+				-0.7
1,635,233	+				+1.1
1,635,233	+				-0.0
1,635,233	+				-0.3
1,635,233	+				-0.4
1,635,234	-				-1.9
1,635,237	+				-0.3
1,635,237	+				+1.3
1,635,237	+				+1.3
1,635,237	+				-0.7
1,635,237	+				-0.7
1,635,408	+				-1.0
1,635,408	+				-0.3
1,635,409	-				+0.1
1,635,409	-				-0.1
1,635,415	+				-0.3
1,635,453	+				+0.7
1,635,453	+				-0.7
1,635,453	+				-0.4
1,635,453	+				+0.6
1,635,453	+				+1.3
1,635,453	+				+0.5
1,635,453	+				+1.3
1,635,453	+				-1.0
1,635,453	+				+0.4
1,635,453	+				-0.6
1,635,453	+				+0.3
1,635,453	+				-0.7
1,635,453	+				-0.5
1,635,453	+				+1.1
1,635,453	+				+0.5
1,635,453	+				+0.4
1,635,454	-				+0.1
1,635,454	-				+0.0
1,635,454	-				+0.4
1,635,454	-				+1.3
1,635,454	-				-0.7
1,635,454	-				+0.7
1,635,457	+				-0.6
1,635,457	+				-0.1
1,635,458	-				+0.8
1,635,458	-				-0.1
1,635,461	+				-2.0
1,635,461	+				-0.0
1,635,461	+				-0.7
1,635,461	+				-0.9
1,635,461	+				-0.9
1,635,461	+				+1.7
1,635,461	+				+0.3
1,635,462	-				-0.2
1,635,462	-				-0.0
1,635,462	-				+1.5
1,635,462	-				-1.0
1,635,496	+				+0.5
1,635,496	+				+1.6
1,635,497	-				-0.1
1,635,497	-				-0.3
1,635,528	+				-0.0
1,635,528	+				-0.6
1,635,528	+				-2.3
1,635,529	-				-0.0
1,635,529	-				+0.1
1,635,697	+		Pf1N1B4_1427	0.49	+0.3
1,635,766	+		Pf1N1B4_1427	0.74	+0.6
1,635,767	-		Pf1N1B4_1427	0.74	-1.3
1,635,783	+		Pf1N1B4_1427	0.80	-0.2
1,635,783	+		Pf1N1B4_1427	0.80	+0.3
1,635,783	+		Pf1N1B4_1427	0.80	+0.5
1,635,783	+		Pf1N1B4_1427	0.80	-2.4
1,635,783	+		Pf1N1B4_1427	0.80	+1.0
1,635,783	+		Pf1N1B4_1427	0.80	-0.9
1,635,784	-		Pf1N1B4_1427	0.81	+0.3
1,635,784	-		Pf1N1B4_1427	0.81	-1.3
1,635,784	-		Pf1N1B4_1427	0.81	+0.3
1,635,784	-		Pf1N1B4_1427	0.81	+2.2
1,635,784	-		Pf1N1B4_1427	0.81	-0.0
1,635,784	-		Pf1N1B4_1427	0.81	-0.0
1,635,784	-		Pf1N1B4_1427	0.81	+0.5
1,635,825	+				+0.9
1,635,825	+				+0.1
1,635,825	+				-0.3
1,635,825	+				+0.2
1,635,825	+				+1.5
1,635,825	+				-0.0
1,635,825	+				+0.7
1,635,825	+				+1.3
1,635,825	+				-0.3
1,635,825	+				+0.4
1,635,826	-				+0.2
1,635,826	-				+0.3
1,635,826	-				-0.3
1,635,826	-				-0.1
1,635,826	-				+0.9
1,635,830	-				-1.7
1,635,830	-				+0.6
1,635,841	+				-1.3
1,635,841	+				+0.7
1,635,842	-				-2.2
1,635,922	+				+1.1
1,635,922	+				-0.0
1,635,922	+				+0.3
1,635,922	+				-0.7
1,635,922	+				-0.7
1,635,922	+				-0.2
1,635,923	-				-2.0
1,635,923	-				-0.4
1,635,923	-				-0.9
1,635,923	-				+0.9
1,635,923	-				-1.0
1,635,923	-				-1.0
1,635,924	+				+0.7
1,635,924	+				+0.0
1,635,925	-				-0.7
1,635,938	-				-0.5
1,635,945	+				-2.6
1,635,945	+				-0.4
1,635,946	-				-0.0
1,635,946	-				-0.3
1,635,946	-				-0.4
1,635,959	+				+1.6
1,635,959	+				+1.3
1,635,960	-				+0.3
1,635,960	-				-2.9
1,636,048	+				+0.7
1,636,048	+				+2.3
1,636,049	-				+0.5
1,636,098	+				-0.4