Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1271

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,452,366	+		Pf1N1B4_1270	0.71	-2.6
1,452,366	+		Pf1N1B4_1270	0.71	-1.1
1,452,367	-		Pf1N1B4_1270	0.71	-0.8
1,452,484	+		Pf1N1B4_1270	0.80	-0.3
1,452,484	+		Pf1N1B4_1270	0.80	+1.2
1,452,485	-		Pf1N1B4_1270	0.80	+0.2
1,452,485	-		Pf1N1B4_1270	0.80	+0.2
1,452,485	-		Pf1N1B4_1270	0.80	+0.5
1,452,485	-		Pf1N1B4_1270	0.80	+0.8
1,452,553	+		Pf1N1B4_1270	0.86	+0.8
1,452,553	+		Pf1N1B4_1270	0.86	+1.2
1,452,553	+		Pf1N1B4_1270	0.86	-1.8
1,452,554	-				+1.6
1,452,554	-		Pf1N1B4_1270	0.86	-0.5
1,452,605	+		Pf1N1B4_1270	0.90	-1.1
1,452,606	-		Pf1N1B4_1270	0.90	+0.2
1,452,607	+		Pf1N1B4_1270	0.90	+1.0
1,452,607	+		Pf1N1B4_1270	0.90	-0.8
1,452,607	+		Pf1N1B4_1270	0.90	-0.1
1,452,608	-		Pf1N1B4_1270	0.90	-0.8
1,452,695	+				+0.6
1,452,696	-				+1.2
1,452,696	-				+0.5
1,452,752	+				+1.0
1,452,753	-				-1.1
1,452,760	+				-0.0
1,452,760	+				+0.0
1,452,760	+				-0.0
1,452,760	+				-0.2
1,452,760	+				+1.2
1,452,760	+				+0.9
1,452,760	+				-2.1
1,452,760	+				-1.1
1,452,761	-				-2.2
1,452,761	-				-0.4
1,452,761	-				-0.8
1,452,761	-				+0.6
1,452,761	-				-2.1
1,452,761	-				-2.1
1,452,761	-				-1.8
1,452,893	+				+0.8
1,452,894	-				-1.1
1,452,930	+				-0.8
1,452,930	+				-1.1
1,452,931	-				-2.2
1,452,937	+				+0.2
1,452,937	+				-1.8
1,452,938	-				-0.8
1,452,957	+				-0.1
1,452,958	-				-2.2
1,452,958	-				-3.0
1,452,984	-				-0.8
1,452,984	-				-0.3
1,453,021	+				-1.1
1,453,021	+				+0.2
1,453,022	-				-2.1
1,453,022	-				-0.8
1,453,022	-				-0.8
1,453,022	-				-3.0
1,453,022	-				-2.5
1,453,022	-				-1.1
1,453,207	+		Pf1N1B4_1271	0.15	-0.4
1,453,207	+		Pf1N1B4_1271	0.15	+0.4
1,453,207	+		Pf1N1B4_1271	0.15	-0.6
1,453,282	+		Pf1N1B4_1271	0.20	-0.3
1,453,282	+		Pf1N1B4_1271	0.20	+0.4
1,453,282	+		Pf1N1B4_1271	0.20	+0.0
1,453,282	+		Pf1N1B4_1271	0.20	+1.5
1,453,283	-		Pf1N1B4_1271	0.20	-1.1
1,453,283	-		Pf1N1B4_1271	0.20	-1.8
1,453,379	+		Pf1N1B4_1271	0.27	-0.9
1,453,379	+		Pf1N1B4_1271	0.27	-0.2
1,453,380	-				-0.8
1,453,380	-		Pf1N1B4_1271	0.27	-1.1
1,453,504	+		Pf1N1B4_1271	0.37	-1.4
1,453,504	+		Pf1N1B4_1271	0.37	-1.4
1,453,504	+		Pf1N1B4_1271	0.37	-0.4
1,453,504	+		Pf1N1B4_1271	0.37	+2.0
1,453,504	+		Pf1N1B4_1271	0.37	-1.6
1,453,504	+		Pf1N1B4_1271	0.37	-0.1
1,453,504	+		Pf1N1B4_1271	0.37	-0.1
1,453,505	-		Pf1N1B4_1271	0.37	-0.8
1,453,505	-		Pf1N1B4_1271	0.37	+1.2
1,453,505	-		Pf1N1B4_1271	0.37	-2.1
1,453,505	-		Pf1N1B4_1271	0.37	-0.1
1,453,505	-		Pf1N1B4_1271	0.37	-2.0
1,453,505	-		Pf1N1B4_1271	0.37	-1.4
1,453,505	-		Pf1N1B4_1271	0.37	-1.4
1,453,505	-		Pf1N1B4_1271	0.37	-1.6
1,453,970	+		Pf1N1B4_1271	0.71	-1.1
1,453,970	+		Pf1N1B4_1271	0.71	-0.2
1,453,971	-		Pf1N1B4_1271	0.71	-2.2
1,453,971	-		Pf1N1B4_1271	0.71	-2.4
1,454,074	+		Pf1N1B4_1271	0.79	-1.5
1,454,074	+		Pf1N1B4_1271	0.79	+0.2
1,454,074	+		Pf1N1B4_1271	0.79	+1.2
1,454,075	-		Pf1N1B4_1271	0.79	+0.2
1,454,415	+				-1.8
1,454,415	+				-0.2
1,454,415	+				-1.1
1,454,415	+				-1.0
1,454,415	+				+1.8
1,454,416	-				-0.4
1,454,416	-				-2.2
1,454,416	-				-2.0
1,454,416	-				-1.1
1,454,416	-				-1.1
1,454,551	+		Pf1N1B4_1272	0.22	-1.4
1,454,551	+		Pf1N1B4_1272	0.22	+0.5
1,454,562	+		Pf1N1B4_1272	0.23	+0.9
1,454,562	+		Pf1N1B4_1272	0.23	+1.2
1,454,563	-				+0.2
1,454,563	-		Pf1N1B4_1272	0.23	+0.2
1,454,563	-		Pf1N1B4_1272	0.23	-2.2
1,454,665	+		Pf1N1B4_1272	0.35	-0.8
1,454,943	+		Pf1N1B4_1272	0.68	+0.6
1,455,029	+		Pf1N1B4_1272	0.78	+0.1
1,455,029	+		Pf1N1B4_1272	0.78	-1.1
1,455,029	+		Pf1N1B4_1272	0.78	+0.9
1,455,029	+		Pf1N1B4_1272	0.78	-0.2
1,455,029	+		Pf1N1B4_1272	0.78	-0.4
1,455,029	+		Pf1N1B4_1272	0.78	-0.6
1,455,030	-		Pf1N1B4_1272	0.78	-0.4
1,455,030	-		Pf1N1B4_1272	0.78	+0.8
1,455,030	-		Pf1N1B4_1272	0.78	-1.4
1,455,030	-		Pf1N1B4_1272	0.78	-0.4
1,455,188	+				+1.6
1,455,188	+				-1.8
1,455,188	+				+1.2
1,455,189	-				-1.1
1,455,189	-				+1.2
1,455,189	-				+0.6
1,455,231	+				+0.6
1,455,231	+				+0.3
1,455,232	-				-0.1