Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1055

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,188,871	+		Pf1N1B4_1053	0.61	+2.2
1,188,871	+		Pf1N1B4_1053	0.61	+0.2
1,188,968	+				-1.0
1,189,283	+		Pf1N1B4_1054	0.33	-1.2
1,189,283	+		Pf1N1B4_1054	0.33	-0.2
1,189,352	+		Pf1N1B4_1054	0.41	+0.2
1,189,352	+		Pf1N1B4_1054	0.41	+0.4
1,189,730	-		Pf1N1B4_1054	0.87	-1.7
1,189,753	+		Pf1N1B4_1054	0.89	-0.8
1,189,753	+		Pf1N1B4_1054	0.89	+1.3
1,189,753	+		Pf1N1B4_1054	0.89	-1.2
1,189,963	+				+0.8
1,189,964	-		Pf1N1B4_1055	0.10	-0.3
1,190,353	+		Pf1N1B4_1055	0.41	+0.1
1,190,385	+		Pf1N1B4_1055	0.43	-1.7
1,190,385	+		Pf1N1B4_1055	0.43	+0.6
1,190,385	+		Pf1N1B4_1055	0.43	-0.4
1,190,385	+		Pf1N1B4_1055	0.43	-0.4
1,190,386	-		Pf1N1B4_1055	0.43	+1.7
1,190,386	-		Pf1N1B4_1055	0.43	-1.2
1,190,605	+		Pf1N1B4_1055	0.61	-1.2
1,190,722	+		Pf1N1B4_1055	0.70	-0.3
1,190,722	+		Pf1N1B4_1055	0.70	-0.4
1,190,722	+				-0.7
1,190,722	+		Pf1N1B4_1055	0.70	-0.3
1,190,831	-		Pf1N1B4_1055	0.78	+0.4
1,191,052	+				-0.1
1,191,052	+				-0.2
1,191,052	+				+0.6
1,191,052	+				+1.9
1,191,052	+				-0.2
1,191,052	+				-1.4
1,191,053	-				+0.1
1,191,093	+				-0.3
1,191,093	+				-2.8
1,191,093	+				-0.5
1,191,093	+				-0.2
1,191,093	+				+2.1
1,191,093	+				+0.4
1,191,093	+				-0.2
1,191,093	+				-0.2
1,191,094	-				+0.8
1,191,094	-				-0.2
1,191,094	-				+0.4
1,191,094	-				-0.1
1,191,094	-				+2.1
1,191,094	-				-1.9
1,191,103	+				+0.3
1,191,103	+				-0.2
1,191,119	+				-0.4
1,191,359	-		Pf1N1B4_1056	0.28	-1.7
1,191,370	+		Pf1N1B4_1056	0.29	-0.1
1,191,421	+		Pf1N1B4_1056	0.35	-0.4
1,191,421	+		Pf1N1B4_1056	0.35	-0.3
1,191,421	+		Pf1N1B4_1056	0.35	+1.7
1,191,421	+		Pf1N1B4_1056	0.35	-1.0
1,191,422	-		Pf1N1B4_1056	0.35	+0.0
1,191,422	-		Pf1N1B4_1056	0.35	-0.4
1,191,548	-		Pf1N1B4_1056	0.49	+0.1
1,191,680	+		Pf1N1B4_1056	0.63	-1.2
1,191,680	+		Pf1N1B4_1056	0.63	-0.4
1,191,680	+		Pf1N1B4_1056	0.63	+0.6
1,191,681	-		Pf1N1B4_1056	0.63	+1.1
1,191,681	-		Pf1N1B4_1056	0.63	-0.4
1,191,901	+		Pf1N1B4_1056	0.87	-1.2
1,191,902	-		Pf1N1B4_1056	0.88	+2.0
1,191,997	+				-0.2
1,191,997	+				-0.4
1,191,997	+				+1.0
1,191,998	-				+0.8