Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1036

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,175,095	+		Pf1N1B4_1034	0.31	+0.9
1,175,105	+		Pf1N1B4_1034	0.34	-1.1
1,175,105	+		Pf1N1B4_1034	0.34	+0.6
1,175,106	-		Pf1N1B4_1034	0.35	-0.4
1,175,106	-		Pf1N1B4_1034	0.35	-0.5
1,175,106	-		Pf1N1B4_1034	0.35	-0.3
1,175,126	+		Pf1N1B4_1034	0.42	+0.8
1,175,126	+		Pf1N1B4_1034	0.42	+0.4
1,175,126	+		Pf1N1B4_1034	0.42	+0.7
1,175,126	+		Pf1N1B4_1034	0.42	+0.8
1,175,126	+		Pf1N1B4_1034	0.42	-0.9
1,175,126	+		Pf1N1B4_1034	0.42	-0.6
1,175,126	+		Pf1N1B4_1034	0.42	+0.7
1,175,127	-		Pf1N1B4_1034	0.43	+1.1
1,175,127	-		Pf1N1B4_1034	0.43	+0.1
1,175,127	-				+1.5
1,175,504	+		Pf1N1B4_1035	0.54	+1.5
1,175,504	+		Pf1N1B4_1035	0.54	+0.4
1,175,504	+				+1.1
1,175,504	+		Pf1N1B4_1035	0.54	+1.6
1,175,504	+		Pf1N1B4_1035	0.54	+1.7
1,175,504	+		Pf1N1B4_1035	0.54	+3.1
1,175,505	-		Pf1N1B4_1035	0.54	+0.3
1,175,505	-		Pf1N1B4_1035	0.54	+1.6
1,175,505	-		Pf1N1B4_1035	0.54	+1.5
1,175,505	-		Pf1N1B4_1035	0.54	-0.4
1,175,685	-				+0.4
1,175,685	-				+0.9
1,175,743	+				+1.9
1,175,751	-				-0.2
1,175,779	+				+0.3
1,175,792	-				-0.4
1,175,915	+		Pf1N1B4_1036	0.20	+0.2
1,175,916	-		Pf1N1B4_1036	0.20	-0.8
1,175,916	-		Pf1N1B4_1036	0.20	-1.4
1,175,916	-		Pf1N1B4_1036	0.20	-0.7
1,175,920	-		Pf1N1B4_1036	0.21	-2.4
1,175,949	-		Pf1N1B4_1036	0.27	-1.1
1,175,950	+		Pf1N1B4_1036	0.27	-1.8
1,175,950	+		Pf1N1B4_1036	0.27	-0.3
1,175,950	+		Pf1N1B4_1036	0.27	+0.9
1,175,950	+		Pf1N1B4_1036	0.27	-0.4
1,175,951	-		Pf1N1B4_1036	0.28	-0.7
1,175,951	-		Pf1N1B4_1036	0.28	+0.4
1,175,951	-		Pf1N1B4_1036	0.28	-0.3
1,175,951	-				+2.2
1,175,951	-		Pf1N1B4_1036	0.28	-2.0
1,176,152	+		Pf1N1B4_1036	0.70	+0.2
1,176,152	+		Pf1N1B4_1036	0.70	-1.2
1,176,153	-		Pf1N1B4_1036	0.70	-0.4
1,176,153	-		Pf1N1B4_1036	0.70	-1.2
1,176,153	-		Pf1N1B4_1036	0.70	-1.2
1,176,153	-		Pf1N1B4_1036	0.70	-0.6
1,176,153	-		Pf1N1B4_1036	0.70	-1.2
1,176,153	-		Pf1N1B4_1036	0.70	-0.6
1,176,153	-		Pf1N1B4_1036	0.70	-1.4
1,176,305	-				-0.8
1,176,544	-		Pf1N1B4_1037	0.32	+0.0
1,176,544	-		Pf1N1B4_1037	0.32	-1.8
1,176,591	+		Pf1N1B4_1037	0.40	-0.4
1,176,591	+		Pf1N1B4_1037	0.40	+1.2
1,176,592	-		Pf1N1B4_1037	0.40	+0.4
1,176,592	-		Pf1N1B4_1037	0.40	+1.0
1,176,592	-		Pf1N1B4_1037	0.40	+0.6
1,176,592	-		Pf1N1B4_1037	0.40	-0.2
1,176,614	+		Pf1N1B4_1037	0.44	-0.0
1,176,614	+		Pf1N1B4_1037	0.44	-0.0
1,176,615	-				+1.2
1,176,615	-		Pf1N1B4_1037	0.44	+0.4
1,176,615	-		Pf1N1B4_1037	0.44	-0.4
1,176,615	-		Pf1N1B4_1037	0.44	-1.4
1,176,615	-		Pf1N1B4_1037	0.44	+0.6
1,176,615	-		Pf1N1B4_1037	0.44	-1.7
1,176,615	-		Pf1N1B4_1037	0.44	-0.8
1,176,615	-		Pf1N1B4_1037	0.44	-0.1
1,176,717	+		Pf1N1B4_1037	0.61	+0.7
1,176,718	-		Pf1N1B4_1037	0.61	-0.8
1,176,854	+		Pf1N1B4_1037	0.83	+1.4
1,176,861	-		Pf1N1B4_1037	0.84	-2.4
1,176,908	+				-0.2
1,176,909	-				+1.3
1,176,909	-				+0.8
1,176,909	-				+0.6
1,176,950	-				-1.7
1,176,950	-				-2.4
1,176,966	+				+0.7
1,176,967	-				+0.2
1,176,967	-				+0.5
1,176,967	-				-0.1
1,176,970	+				-0.5
1,176,970	+				+1.8
1,176,970	+				+1.5
1,176,971	-				-0.4
1,176,971	-				-1.2
1,176,980	+				+1.0
1,177,185	+		Pf1N1B4_1038	0.22	-1.2
1,177,263	-		Pf1N1B4_1038	0.30	+0.9
1,177,285	+		Pf1N1B4_1038	0.32	-0.3
1,177,286	-		Pf1N1B4_1038	0.32	+3.3
1,177,286	-		Pf1N1B4_1038	0.32	+1.2
1,177,286	-		Pf1N1B4_1038	0.32	-0.7