Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1018

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
1,152,293	+		Pf1N1B4_1016	0.59	+0.2
1,152,294	-		Pf1N1B4_1016	0.60	-1.3
1,152,294	-		Pf1N1B4_1016	0.60	-0.5
1,152,294	-		Pf1N1B4_1016	0.60	+0.1
1,152,294	-		Pf1N1B4_1016	0.60	-0.1
1,152,294	-		Pf1N1B4_1016	0.60	-0.1
1,152,294	-		Pf1N1B4_1016	0.60	+1.0
1,152,407	+		Pf1N1B4_1016	0.82	+0.6
1,152,408	-		Pf1N1B4_1016	0.82	+0.1
1,152,746	+				-0.5
1,152,746	+				+0.1
1,152,747	-				-0.5
1,152,747	-				-0.1
1,152,747	-				-2.2
1,152,747	-				-1.2
1,152,751	+				+1.1
1,152,751	+				-0.5
1,152,752	-				-0.0
1,152,752	-				+1.5
1,152,752	-				+1.1
1,152,752	-				-0.1
1,152,752	-				+0.8
1,152,785	+				+1.9
1,152,800	-				+0.1
1,152,800	-				-0.3
1,152,804	-				-0.3
1,152,812	+				+0.4
1,152,829	+				-0.9
1,152,829	+				-0.2
1,152,829	+				-0.5
1,152,829	+				+0.6
1,152,829	+				-0.2
1,152,829	+				+2.7
1,152,829	+				+0.3
1,152,830	-				-0.6
1,152,830	-				+0.7
1,152,830	-				+0.9
1,152,830	-				+0.5
1,152,830	-				-1.5
1,152,871	+				+0.1
1,152,871	+				+0.6
1,152,871	+				-1.7
1,152,872	-				-0.9
1,152,872	-				-2.3
1,152,872	-				-0.3
1,152,872	-				-1.8
1,152,872	-				-0.3
1,152,873	+				+0.3
1,153,026	+		Pf1N1B4_1017	0.47	+1.5
1,153,026	+		Pf1N1B4_1017	0.47	+1.1
1,153,026	+		Pf1N1B4_1017	0.47	-0.7
1,153,026	+		Pf1N1B4_1017	0.47	-0.5
1,153,026	+		Pf1N1B4_1017	0.47	-1.0
1,153,026	+		Pf1N1B4_1017	0.47	-0.5
1,153,026	+				-0.2
1,153,026	+				+1.1
1,153,027	-		Pf1N1B4_1017	0.47	+0.4
1,153,048	+		Pf1N1B4_1017	0.53	+1.5
1,153,048	+		Pf1N1B4_1017	0.53	+0.1
1,153,048	+		Pf1N1B4_1017	0.53	-0.9
1,153,048	+				+0.1
1,153,048	+		Pf1N1B4_1017	0.53	-1.0
1,153,049	-		Pf1N1B4_1017	0.53	+0.8
1,153,049	-		Pf1N1B4_1017	0.53	-2.5
1,153,049	-		Pf1N1B4_1017	0.53	+0.1
1,153,150	+		Pf1N1B4_1017	0.81	+0.3
1,153,150	+		Pf1N1B4_1017	0.81	-0.5
1,153,150	+		Pf1N1B4_1017	0.81	-0.5
1,153,150	+				-0.5
1,153,218	+				+0.8
1,153,218	+				-1.1
1,153,218	+				-1.0
1,153,218	+				+0.3
1,153,218	+				-0.7
1,153,219	-				-1.7
1,153,219	-				+0.4
1,153,238	+				-0.4
1,153,238	+				+0.3
1,153,238	+				-1.2
1,153,239	-				-0.9
1,153,288	+				+0.1
1,153,288	+				-0.9
1,153,289	-				-1.2
1,153,289	-				+1.1
1,153,753	-		Pf1N1B4_1018	0.42	-0.5
1,153,900	-		Pf1N1B4_1018	0.55	+0.1
1,153,900	-		Pf1N1B4_1018	0.55	+0.5
1,153,900	-		Pf1N1B4_1018	0.55	-0.7
1,153,900	-		Pf1N1B4_1018	0.55	-2.0
1,154,173	+		Pf1N1B4_1018	0.80	-1.6
1,154,245	+		Pf1N1B4_1018	0.86	-0.6
1,154,389	+				+0.4
1,154,389	+				-0.4
1,154,390	-				-0.2
1,154,390	-				-0.3
1,154,390	-				-1.2
1,154,432	+				-0.4
1,154,433	-				-1.4
1,154,486	+				-0.7
1,154,486	+				+1.4
1,154,486	+				-0.7
1,154,486	+				-0.2
1,154,486	+				-0.3
1,154,486	+				-0.4
1,154,486	+				+0.0
1,154,486	+				+2.1
1,154,486	+				-0.9
1,154,486	+				+0.9
1,154,486	+				+0.0
1,154,486	+				+1.1
1,154,487	-				-0.7
1,154,487	-				-0.3
1,154,487	-				+0.9
1,154,487	-				+1.7
1,154,487	-				+0.5
1,154,504	+				+0.1
1,154,577	-		Pf1N1B4_1019	0.15	+2.1
1,154,793	+		Pf1N1B4_1019	0.37	+0.1
1,154,793	+		Pf1N1B4_1019	0.37	+0.1
1,154,793	+		Pf1N1B4_1019	0.37	+0.6
1,154,794	-		Pf1N1B4_1019	0.37	-1.2
1,154,794	-		Pf1N1B4_1019	0.37	-1.1
1,154,794	-		Pf1N1B4_1019	0.37	-0.3
1,154,880	-		Pf1N1B4_1019	0.46	+1.0
1,154,902	+		Pf1N1B4_1019	0.48	+0.4
1,154,902	+		Pf1N1B4_1019	0.48	-0.4
1,154,903	-		Pf1N1B4_1019	0.48	+1.1
1,154,903	-		Pf1N1B4_1019	0.48	+0.7
1,155,146	+		Pf1N1B4_1019	0.73	-0.9
1,155,146	+		Pf1N1B4_1019	0.73	+0.5
1,155,146	+		Pf1N1B4_1019	0.73	-0.2
1,155,146	+		Pf1N1B4_1019	0.73	-0.2
1,155,147	-		Pf1N1B4_1019	0.73	+0.7
1,155,147	-		Pf1N1B4_1019	0.73	+0.1
1,155,147	-				+0.1
1,155,147	-		Pf1N1B4_1019	0.73	-0.7
1,155,311	-		Pf1N1B4_1019	0.89	-1.4