Experiment: Nalidixic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS22045 and ABZR86_RS22050 are separated by 106 nucleotides ABZR86_RS22050 and ABZR86_RS22055 are separated by 69 nucleotides
ABZR86_RS22045: ABZR86_RS22045 - tetratricopeptide repeat protein, at 370,728 to 372,464
_RS22045
ABZR86_RS22050: ABZR86_RS22050 - glutamyl-tRNA reductase, at 372,571 to 373,845
_RS22050
ABZR86_RS22055: ABZR86_RS22055 - peptide chain release factor 1, at 373,915 to 374,988
_RS22055
Position (kb) 372
373
374 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 371.587 kb on + strand, within ABZR86_RS22045 at 371.587 kb on + strand, within ABZR86_RS22045 at 371.587 kb on + strand, within ABZR86_RS22045 at 371.588 kb on - strand, within ABZR86_RS22045 at 371.588 kb on - strand, within ABZR86_RS22045 at 371.638 kb on + strand, within ABZR86_RS22045 at 371.638 kb on + strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.639 kb on - strand, within ABZR86_RS22045 at 371.668 kb on + strand, within ABZR86_RS22045 at 371.669 kb on - strand, within ABZR86_RS22045 at 371.755 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.779 kb on + strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.780 kb on - strand, within ABZR86_RS22045 at 371.834 kb on - strand, within ABZR86_RS22045 at 372.223 kb on + strand, within ABZR86_RS22045 at 372.223 kb on + strand, within ABZR86_RS22045 at 372.224 kb on - strand, within ABZR86_RS22045 at 372.467 kb on + strand at 372.467 kb on + strand at 372.468 kb on - strand at 372.468 kb on - strand at 372.468 kb on - strand at 372.468 kb on - strand at 372.487 kb on + strand at 372.487 kb on + strand at 372.487 kb on + strand at 372.487 kb on + strand at 372.527 kb on + strand at 372.527 kb on + strand at 372.527 kb on + strand at 372.527 kb on + strand at 372.528 kb on - strand at 372.532 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.01 mg/ml remove 371,587 + ABZR86_RS22045 0.49 -1.1 371,587 + ABZR86_RS22045 0.49 -1.3 371,587 + ABZR86_RS22045 0.49 -2.1 371,588 - ABZR86_RS22045 0.50 -1.7 371,588 - ABZR86_RS22045 0.50 -2.0 371,638 + ABZR86_RS22045 0.52 -1.0 371,638 + ABZR86_RS22045 0.52 -1.8 371,639 - ABZR86_RS22045 0.52 -1.2 371,639 - ABZR86_RS22045 0.52 -2.8 371,639 - ABZR86_RS22045 0.52 -0.6 371,639 - ABZR86_RS22045 0.52 -0.4 371,668 + ABZR86_RS22045 0.54 -3.4 371,669 - ABZR86_RS22045 0.54 -0.7 371,755 + ABZR86_RS22045 0.59 -2.8 371,779 + ABZR86_RS22045 0.61 -2.2 371,779 + ABZR86_RS22045 0.61 -1.1 371,779 + ABZR86_RS22045 0.61 -3.1 371,779 + ABZR86_RS22045 0.61 -1.2 371,779 + ABZR86_RS22045 0.61 -1.3 371,779 + ABZR86_RS22045 0.61 -2.1 371,779 + ABZR86_RS22045 0.61 -2.4 371,779 + ABZR86_RS22045 0.61 -1.6 371,779 + ABZR86_RS22045 0.61 -1.4 371,779 + ABZR86_RS22045 0.61 -1.5 371,779 + ABZR86_RS22045 0.61 -4.3 371,780 - ABZR86_RS22045 0.61 +0.1 371,780 - ABZR86_RS22045 0.61 -2.5 371,780 - ABZR86_RS22045 0.61 +1.0 371,780 - ABZR86_RS22045 0.61 -1.4 371,780 - ABZR86_RS22045 0.61 -1.3 371,780 - ABZR86_RS22045 0.61 -1.5 371,780 - ABZR86_RS22045 0.61 -1.7 371,780 - ABZR86_RS22045 0.61 -1.2 371,780 - ABZR86_RS22045 0.61 +0.0 371,780 - ABZR86_RS22045 0.61 -0.9 371,780 - ABZR86_RS22045 0.61 -1.2 371,780 - ABZR86_RS22045 0.61 -0.8 371,780 - ABZR86_RS22045 0.61 -1.4 371,834 - ABZR86_RS22045 0.64 -1.3 372,223 + ABZR86_RS22045 0.86 -2.8 372,223 + ABZR86_RS22045 0.86 -1.4 372,224 - ABZR86_RS22045 0.86 -0.9 372,467 + -1.5 372,467 + -2.1 372,468 - -1.2 372,468 - -1.7 372,468 - -0.1 372,468 - -1.3 372,487 + -1.8 372,487 + -0.7 372,487 + -0.8 372,487 + -1.1 372,527 + -0.2 372,527 + -0.1 372,527 + +0.1 372,527 + -0.0 372,528 - -0.3 372,532 + +0.1
Or see this region's nucleotide sequence