Experiment: Nalidixic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21770 and ABZR86_RS21775 are separated by 23 nucleotides ABZR86_RS21775 and ABZR86_RS21780 are separated by 199 nucleotides ABZR86_RS21780 and ABZR86_RS21785 are separated by 210 nucleotides
ABZR86_RS21770: ABZR86_RS21770 - class II 3-deoxy-7-phosphoheptulonate synthase, at 328,735 to 330,108
_RS21770
ABZR86_RS21775: ABZR86_RS21775 - disulfide bond formation protein B, at 330,132 to 330,635
_RS21775
ABZR86_RS21780: ABZR86_RS21780 - 50S ribosomal protein L17, at 330,835 to 331,218
_RS21780
ABZR86_RS21785: ABZR86_RS21785 - DNA-directed RNA polymerase subunit alpha, at 331,429 to 332,427
_RS21785
Position (kb) 330
331 Strain fitness (log2 ratio) -1
0
1
2 at 329.252 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.366 kb on + strand, within ABZR86_RS21770 at 329.367 kb on - strand, within ABZR86_RS21770 at 329.532 kb on - strand, within ABZR86_RS21770 at 329.701 kb on + strand, within ABZR86_RS21770 at 329.744 kb on + strand, within ABZR86_RS21770 at 329.821 kb on + strand, within ABZR86_RS21770 at 329.822 kb on - strand, within ABZR86_RS21770 at 330.710 kb on - strand at 330.812 kb on + strand at 330.812 kb on + strand at 330.836 kb on + strand at 330.836 kb on + strand at 330.836 kb on + strand at 330.837 kb on - strand at 331.233 kb on - strand at 331.245 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.315 kb on - strand at 331.315 kb on - strand at 331.317 kb on - strand at 331.317 kb on - strand at 331.317 kb on - strand at 331.355 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.01 mg/ml remove 329,252 + ABZR86_RS21770 0.38 +1.2 329,366 + ABZR86_RS21770 0.46 -0.0 329,366 + ABZR86_RS21770 0.46 +0.2 329,366 + ABZR86_RS21770 0.46 -0.3 329,366 + ABZR86_RS21770 0.46 -0.3 329,367 - ABZR86_RS21770 0.46 -1.3 329,532 - ABZR86_RS21770 0.58 +0.2 329,701 + ABZR86_RS21770 0.70 -0.4 329,744 + ABZR86_RS21770 0.73 -0.3 329,821 + ABZR86_RS21770 0.79 -0.4 329,822 - ABZR86_RS21770 0.79 -0.2 330,710 - -0.0 330,812 + +1.9 330,812 + +2.5 330,836 + +2.0 330,836 + +1.9 330,836 + +1.7 330,837 - +1.3 331,233 - +0.1 331,245 - -0.2 331,301 - -0.0 331,301 - -0.6 331,301 - +0.0 331,301 - +0.1 331,301 - -0.9 331,315 - -0.0 331,315 - +0.3 331,317 - +0.5 331,317 - -0.3 331,317 - +0.0 331,355 - -0.1
Or see this region's nucleotide sequence