Experiment: Nalidixic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21215 and ABZR86_RS21220 are separated by 14 nucleotides ABZR86_RS21220 and ABZR86_RS21225 are separated by 236 nucleotides ABZR86_RS21225 and ABZR86_RS21230 are separated by 66 nucleotides
ABZR86_RS21215: ABZR86_RS21215 - L-histidine N(alpha)-methyltransferase, at 211,495 to 212,472
_RS21215
ABZR86_RS21220: ABZR86_RS21220 - ergothioneine biosynthesis protein EgtB, at 212,487 to 213,752
_RS21220
ABZR86_RS21225: ABZR86_RS21225 - DUF6491 family protein, at 213,989 to 214,429
_RS21225
ABZR86_RS21230: ABZR86_RS21230 - hypothetical protein, at 214,496 to 214,858
_RS21230
Position (kb) 212
213
214 Strain fitness (log2 ratio) -1
0
1
2 at 211.517 kb on + strand at 211.518 kb on - strand at 211.518 kb on - strand at 211.610 kb on + strand, within ABZR86_RS21215 at 211.610 kb on + strand, within ABZR86_RS21215 at 211.611 kb on - strand, within ABZR86_RS21215 at 211.622 kb on + strand, within ABZR86_RS21215 at 211.622 kb on + strand, within ABZR86_RS21215 at 211.623 kb on - strand, within ABZR86_RS21215 at 211.623 kb on - strand, within ABZR86_RS21215 at 211.736 kb on + strand, within ABZR86_RS21215 at 211.736 kb on + strand, within ABZR86_RS21215 at 211.736 kb on + strand, within ABZR86_RS21215 at 211.737 kb on - strand, within ABZR86_RS21215 at 211.737 kb on - strand, within ABZR86_RS21215 at 211.897 kb on + strand, within ABZR86_RS21215 at 211.897 kb on + strand, within ABZR86_RS21215 at 211.897 kb on + strand, within ABZR86_RS21215 at 211.898 kb on - strand, within ABZR86_RS21215 at 211.898 kb on - strand, within ABZR86_RS21215 at 211.898 kb on - strand, within ABZR86_RS21215 at 211.898 kb on - strand, within ABZR86_RS21215 at 211.991 kb on + strand, within ABZR86_RS21215 at 211.991 kb on + strand, within ABZR86_RS21215 at 211.992 kb on - strand, within ABZR86_RS21215 at 211.992 kb on - strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.147 kb on + strand, within ABZR86_RS21215 at 212.148 kb on - strand, within ABZR86_RS21215 at 212.148 kb on - strand, within ABZR86_RS21215 at 212.148 kb on - strand, within ABZR86_RS21215 at 212.148 kb on - strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.297 kb on + strand, within ABZR86_RS21215 at 212.298 kb on - strand, within ABZR86_RS21215 at 212.298 kb on - strand, within ABZR86_RS21215 at 212.298 kb on - strand, within ABZR86_RS21215 at 212.298 kb on - strand, within ABZR86_RS21215 at 212.298 kb on - strand, within ABZR86_RS21215 at 212.300 kb on + strand, within ABZR86_RS21215 at 212.301 kb on - strand, within ABZR86_RS21215 at 212.301 kb on - strand, within ABZR86_RS21215 at 212.301 kb on - strand, within ABZR86_RS21215 at 212.301 kb on - strand, within ABZR86_RS21215 at 212.351 kb on + strand, within ABZR86_RS21215 at 212.351 kb on + strand, within ABZR86_RS21215 at 212.352 kb on - strand, within ABZR86_RS21215 at 212.554 kb on + strand at 212.554 kb on + strand at 212.555 kb on - strand at 212.555 kb on - strand at 212.635 kb on + strand, within ABZR86_RS21220 at 212.635 kb on + strand, within ABZR86_RS21220 at 212.635 kb on + strand, within ABZR86_RS21220 at 212.635 kb on + strand, within ABZR86_RS21220 at 212.636 kb on - strand, within ABZR86_RS21220 at 212.636 kb on - strand, within ABZR86_RS21220 at 212.636 kb on - strand, within ABZR86_RS21220 at 212.636 kb on - strand, within ABZR86_RS21220 at 212.675 kb on - strand, within ABZR86_RS21220 at 212.683 kb on + strand, within ABZR86_RS21220 at 212.683 kb on + strand, within ABZR86_RS21220 at 212.716 kb on + strand, within ABZR86_RS21220 at 212.716 kb on + strand, within ABZR86_RS21220 at 212.716 kb on + strand, within ABZR86_RS21220 at 212.716 kb on + strand, within ABZR86_RS21220 at 212.716 kb on + strand, within ABZR86_RS21220 at 212.727 kb on + strand, within ABZR86_RS21220 at 212.727 kb on + strand, within ABZR86_RS21220 at 212.728 kb on - strand, within ABZR86_RS21220 at 212.728 kb on - strand, within ABZR86_RS21220 at 212.932 kb on + strand, within ABZR86_RS21220 at 212.932 kb on + strand, within ABZR86_RS21220 at 212.959 kb on + strand, within ABZR86_RS21220 at 212.959 kb on + strand, within ABZR86_RS21220 at 213.193 kb on + strand, within ABZR86_RS21220 at 213.194 kb on - strand, within ABZR86_RS21220 at 213.194 kb on - strand, within ABZR86_RS21220 at 213.194 kb on - strand, within ABZR86_RS21220 at 213.194 kb on - strand, within ABZR86_RS21220 at 213.490 kb on + strand, within ABZR86_RS21220 at 213.491 kb on - strand, within ABZR86_RS21220 at 213.493 kb on + strand, within ABZR86_RS21220 at 213.493 kb on + strand, within ABZR86_RS21220 at 213.493 kb on + strand, within ABZR86_RS21220 at 213.508 kb on + strand, within ABZR86_RS21220 at 213.508 kb on + strand, within ABZR86_RS21220 at 213.508 kb on + strand, within ABZR86_RS21220 at 213.508 kb on + strand, within ABZR86_RS21220 at 213.508 kb on + strand, within ABZR86_RS21220 at 213.508 kb on + strand, within ABZR86_RS21220 at 213.509 kb on - strand, within ABZR86_RS21220 at 213.509 kb on - strand, within ABZR86_RS21220 at 213.509 kb on - strand, within ABZR86_RS21220 at 213.509 kb on - strand, within ABZR86_RS21220 at 213.509 kb on - strand, within ABZR86_RS21220 at 213.509 kb on - strand, within ABZR86_RS21220 at 213.581 kb on + strand, within ABZR86_RS21220 at 213.581 kb on + strand, within ABZR86_RS21220 at 213.582 kb on - strand, within ABZR86_RS21220 at 213.817 kb on + strand at 213.818 kb on - strand at 213.913 kb on + strand at 213.913 kb on + strand at 213.914 kb on - strand at 213.914 kb on - strand at 213.914 kb on - strand at 213.914 kb on - strand at 214.117 kb on + strand, within ABZR86_RS21225 at 214.117 kb on + strand, within ABZR86_RS21225 at 214.117 kb on + strand, within ABZR86_RS21225 at 214.117 kb on + strand, within ABZR86_RS21225 at 214.117 kb on + strand, within ABZR86_RS21225 at 214.118 kb on - strand, within ABZR86_RS21225 at 214.118 kb on - strand, within ABZR86_RS21225 at 214.118 kb on - strand, within ABZR86_RS21225 at 214.206 kb on + strand, within ABZR86_RS21225 at 214.206 kb on + strand, within ABZR86_RS21225 at 214.207 kb on - strand, within ABZR86_RS21225 at 214.213 kb on - strand, within ABZR86_RS21225 at 214.367 kb on + strand, within ABZR86_RS21225 at 214.367 kb on + strand, within ABZR86_RS21225 at 214.367 kb on + strand, within ABZR86_RS21225 at 214.368 kb on - strand, within ABZR86_RS21225 at 214.510 kb on - strand at 214.513 kb on - strand at 214.539 kb on + strand, within ABZR86_RS21230 at 214.539 kb on + strand, within ABZR86_RS21230 at 214.540 kb on - strand, within ABZR86_RS21230 at 214.540 kb on - strand, within ABZR86_RS21230 at 214.540 kb on - strand, within ABZR86_RS21230 at 214.542 kb on + strand, within ABZR86_RS21230 at 214.557 kb on + strand, within ABZR86_RS21230 at 214.557 kb on + strand, within ABZR86_RS21230 at 214.558 kb on - strand, within ABZR86_RS21230 at 214.558 kb on - strand, within ABZR86_RS21230 at 214.572 kb on + strand, within ABZR86_RS21230 at 214.572 kb on + strand, within ABZR86_RS21230 at 214.572 kb on + strand, within ABZR86_RS21230 at 214.572 kb on + strand, within ABZR86_RS21230 at 214.572 kb on + strand, within ABZR86_RS21230 at 214.573 kb on - strand, within ABZR86_RS21230 at 214.573 kb on - strand, within ABZR86_RS21230 at 214.573 kb on - strand, within ABZR86_RS21230 at 214.573 kb on - strand, within ABZR86_RS21230 at 214.605 kb on + strand, within ABZR86_RS21230 at 214.605 kb on + strand, within ABZR86_RS21230 at 214.606 kb on - strand, within ABZR86_RS21230 at 214.606 kb on - strand, within ABZR86_RS21230 at 214.606 kb on - strand, within ABZR86_RS21230 at 214.606 kb on - strand, within ABZR86_RS21230 at 214.608 kb on + strand, within ABZR86_RS21230 at 214.608 kb on + strand, within ABZR86_RS21230 at 214.608 kb on + strand, within ABZR86_RS21230 at 214.608 kb on + strand, within ABZR86_RS21230 at 214.608 kb on + strand, within ABZR86_RS21230 at 214.608 kb on + strand, within ABZR86_RS21230 at 214.609 kb on - strand, within ABZR86_RS21230 at 214.609 kb on - strand, within ABZR86_RS21230 at 214.609 kb on - strand, within ABZR86_RS21230 at 214.609 kb on - strand, within ABZR86_RS21230 at 214.632 kb on + strand, within ABZR86_RS21230 at 214.632 kb on + strand, within ABZR86_RS21230 at 214.632 kb on + strand, within ABZR86_RS21230 at 214.633 kb on - strand, within ABZR86_RS21230 at 214.633 kb on - strand, within ABZR86_RS21230 at 214.633 kb on - strand, within ABZR86_RS21230 at 214.635 kb on + strand, within ABZR86_RS21230 at 214.636 kb on - strand, within ABZR86_RS21230 at 214.636 kb on - strand, within ABZR86_RS21230 at 214.651 kb on - strand, within ABZR86_RS21230 at 214.662 kb on + strand, within ABZR86_RS21230 at 214.662 kb on + strand, within ABZR86_RS21230 at 214.663 kb on - strand, within ABZR86_RS21230 at 214.663 kb on - strand, within ABZR86_RS21230 at 214.665 kb on + strand, within ABZR86_RS21230 at 214.677 kb on + strand, within ABZR86_RS21230 at 214.678 kb on - strand, within ABZR86_RS21230
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.01 mg/ml remove 211,517 + +0.4 211,518 - +0.2 211,518 - +0.7 211,610 + ABZR86_RS21215 0.12 +0.3 211,610 + ABZR86_RS21215 0.12 -0.0 211,611 - ABZR86_RS21215 0.12 +0.6 211,622 + ABZR86_RS21215 0.13 -0.0 211,622 + ABZR86_RS21215 0.13 -0.5 211,623 - ABZR86_RS21215 0.13 +0.5 211,623 - ABZR86_RS21215 0.13 -0.1 211,736 + ABZR86_RS21215 0.25 -0.3 211,736 + ABZR86_RS21215 0.25 +2.7 211,736 + ABZR86_RS21215 0.25 -0.1 211,737 - ABZR86_RS21215 0.25 -0.2 211,737 - ABZR86_RS21215 0.25 -0.2 211,897 + ABZR86_RS21215 0.41 +0.2 211,897 + ABZR86_RS21215 0.41 -0.8 211,897 + ABZR86_RS21215 0.41 +0.7 211,898 - ABZR86_RS21215 0.41 +0.2 211,898 - ABZR86_RS21215 0.41 -1.0 211,898 - ABZR86_RS21215 0.41 -0.4 211,898 - ABZR86_RS21215 0.41 +0.3 211,991 + ABZR86_RS21215 0.51 -0.1 211,991 + ABZR86_RS21215 0.51 +1.4 211,992 - ABZR86_RS21215 0.51 -0.2 211,992 - ABZR86_RS21215 0.51 +0.0 212,147 + ABZR86_RS21215 0.67 +0.6 212,147 + ABZR86_RS21215 0.67 +0.8 212,147 + ABZR86_RS21215 0.67 +0.4 212,147 + ABZR86_RS21215 0.67 +0.2 212,147 + ABZR86_RS21215 0.67 -1.3 212,147 + ABZR86_RS21215 0.67 -0.8 212,147 + ABZR86_RS21215 0.67 -0.7 212,148 - ABZR86_RS21215 0.67 -0.2 212,148 - ABZR86_RS21215 0.67 -0.7 212,148 - ABZR86_RS21215 0.67 -1.0 212,148 - ABZR86_RS21215 0.67 -0.5 212,297 + ABZR86_RS21215 0.82 -0.6 212,297 + ABZR86_RS21215 0.82 -0.4 212,297 + ABZR86_RS21215 0.82 -0.3 212,297 + ABZR86_RS21215 0.82 +1.0 212,297 + ABZR86_RS21215 0.82 -0.5 212,297 + ABZR86_RS21215 0.82 +0.1 212,297 + ABZR86_RS21215 0.82 +1.0 212,297 + ABZR86_RS21215 0.82 +0.4 212,298 - ABZR86_RS21215 0.82 +0.1 212,298 - ABZR86_RS21215 0.82 +1.4 212,298 - ABZR86_RS21215 0.82 -0.1 212,298 - ABZR86_RS21215 0.82 -0.1 212,298 - ABZR86_RS21215 0.82 +0.5 212,300 + ABZR86_RS21215 0.82 -0.2 212,301 - ABZR86_RS21215 0.82 -0.5 212,301 - ABZR86_RS21215 0.82 +0.0 212,301 - ABZR86_RS21215 0.82 +0.3 212,301 - ABZR86_RS21215 0.82 -0.7 212,351 + ABZR86_RS21215 0.88 -0.2 212,351 + ABZR86_RS21215 0.88 +0.3 212,352 - ABZR86_RS21215 0.88 -0.3 212,554 + +0.5 212,554 + -0.1 212,555 - +0.2 212,555 - +0.0 212,635 + ABZR86_RS21220 0.12 -0.2 212,635 + ABZR86_RS21220 0.12 +0.3 212,635 + ABZR86_RS21220 0.12 +0.7 212,635 + ABZR86_RS21220 0.12 +0.4 212,636 - ABZR86_RS21220 0.12 -0.2 212,636 - ABZR86_RS21220 0.12 +0.5 212,636 - ABZR86_RS21220 0.12 +0.3 212,636 - ABZR86_RS21220 0.12 +0.9 212,675 - ABZR86_RS21220 0.15 -0.3 212,683 + ABZR86_RS21220 0.15 +0.2 212,683 + ABZR86_RS21220 0.15 +0.1 212,716 + ABZR86_RS21220 0.18 -0.6 212,716 + ABZR86_RS21220 0.18 +0.2 212,716 + ABZR86_RS21220 0.18 -0.7 212,716 + ABZR86_RS21220 0.18 +0.2 212,716 + ABZR86_RS21220 0.18 -0.0 212,727 + ABZR86_RS21220 0.19 -0.1 212,727 + ABZR86_RS21220 0.19 +0.2 212,728 - ABZR86_RS21220 0.19 +0.7 212,728 - ABZR86_RS21220 0.19 +0.4 212,932 + ABZR86_RS21220 0.35 +0.5 212,932 + ABZR86_RS21220 0.35 +1.4 212,959 + ABZR86_RS21220 0.37 +0.3 212,959 + ABZR86_RS21220 0.37 +0.6 213,193 + ABZR86_RS21220 0.56 -0.6 213,194 - ABZR86_RS21220 0.56 +0.1 213,194 - ABZR86_RS21220 0.56 +0.5 213,194 - ABZR86_RS21220 0.56 -0.4 213,194 - ABZR86_RS21220 0.56 +0.1 213,490 + ABZR86_RS21220 0.79 -0.3 213,491 - ABZR86_RS21220 0.79 +0.7 213,493 + ABZR86_RS21220 0.79 -0.0 213,493 + ABZR86_RS21220 0.79 -0.2 213,493 + ABZR86_RS21220 0.79 -0.0 213,508 + ABZR86_RS21220 0.81 +0.2 213,508 + ABZR86_RS21220 0.81 +0.8 213,508 + ABZR86_RS21220 0.81 -0.1 213,508 + ABZR86_RS21220 0.81 +0.2 213,508 + ABZR86_RS21220 0.81 +0.1 213,508 + ABZR86_RS21220 0.81 +0.2 213,509 - ABZR86_RS21220 0.81 +0.4 213,509 - ABZR86_RS21220 0.81 -0.5 213,509 - ABZR86_RS21220 0.81 +0.0 213,509 - ABZR86_RS21220 0.81 +0.7 213,509 - ABZR86_RS21220 0.81 -0.3 213,509 - ABZR86_RS21220 0.81 -0.6 213,581 + ABZR86_RS21220 0.86 -0.2 213,581 + ABZR86_RS21220 0.86 +0.3 213,582 - ABZR86_RS21220 0.86 +0.8 213,817 + -0.4 213,818 - +0.2 213,913 + +0.2 213,913 + -0.1 213,914 - -0.0 213,914 - -0.4 213,914 - +0.4 213,914 - +1.2 214,117 + ABZR86_RS21225 0.29 +0.8 214,117 + ABZR86_RS21225 0.29 +0.4 214,117 + ABZR86_RS21225 0.29 +0.7 214,117 + ABZR86_RS21225 0.29 -0.4 214,117 + ABZR86_RS21225 0.29 +0.2 214,118 - ABZR86_RS21225 0.29 -0.2 214,118 - ABZR86_RS21225 0.29 -0.2 214,118 - ABZR86_RS21225 0.29 -0.7 214,206 + ABZR86_RS21225 0.49 -0.7 214,206 + ABZR86_RS21225 0.49 +0.4 214,207 - ABZR86_RS21225 0.49 +0.9 214,213 - ABZR86_RS21225 0.51 +1.3 214,367 + ABZR86_RS21225 0.86 -0.0 214,367 + ABZR86_RS21225 0.86 +0.4 214,367 + ABZR86_RS21225 0.86 +0.4 214,368 - ABZR86_RS21225 0.86 +0.4 214,510 - -0.5 214,513 - -0.3 214,539 + ABZR86_RS21230 0.12 -0.4 214,539 + ABZR86_RS21230 0.12 +0.8 214,540 - ABZR86_RS21230 0.12 -0.3 214,540 - ABZR86_RS21230 0.12 -0.4 214,540 - ABZR86_RS21230 0.12 +0.2 214,542 + ABZR86_RS21230 0.13 +0.2 214,557 + ABZR86_RS21230 0.17 -0.4 214,557 + ABZR86_RS21230 0.17 +0.2 214,558 - ABZR86_RS21230 0.17 -0.6 214,558 - ABZR86_RS21230 0.17 -1.0 214,572 + ABZR86_RS21230 0.21 -0.4 214,572 + ABZR86_RS21230 0.21 -0.3 214,572 + ABZR86_RS21230 0.21 -0.1 214,572 + ABZR86_RS21230 0.21 -0.3 214,572 + ABZR86_RS21230 0.21 -0.3 214,573 - ABZR86_RS21230 0.21 -1.0 214,573 - ABZR86_RS21230 0.21 -0.7 214,573 - ABZR86_RS21230 0.21 +0.3 214,573 - ABZR86_RS21230 0.21 -1.3 214,605 + ABZR86_RS21230 0.30 +0.8 214,605 + ABZR86_RS21230 0.30 -0.4 214,606 - ABZR86_RS21230 0.30 -0.2 214,606 - ABZR86_RS21230 0.30 +0.4 214,606 - ABZR86_RS21230 0.30 -0.3 214,606 - ABZR86_RS21230 0.30 -0.3 214,608 + ABZR86_RS21230 0.31 -0.1 214,608 + ABZR86_RS21230 0.31 -1.2 214,608 + ABZR86_RS21230 0.31 -0.2 214,608 + ABZR86_RS21230 0.31 +0.0 214,608 + ABZR86_RS21230 0.31 -0.3 214,608 + ABZR86_RS21230 0.31 -1.0 214,609 - ABZR86_RS21230 0.31 -1.6 214,609 - ABZR86_RS21230 0.31 +0.0 214,609 - ABZR86_RS21230 0.31 -0.8 214,609 - ABZR86_RS21230 0.31 -0.6 214,632 + ABZR86_RS21230 0.37 -0.1 214,632 + ABZR86_RS21230 0.37 -0.3 214,632 + ABZR86_RS21230 0.37 -0.2 214,633 - ABZR86_RS21230 0.38 -0.4 214,633 - ABZR86_RS21230 0.38 -0.5 214,633 - ABZR86_RS21230 0.38 +0.0 214,635 + ABZR86_RS21230 0.38 +0.2 214,636 - ABZR86_RS21230 0.39 -0.2 214,636 - ABZR86_RS21230 0.39 +0.7 214,651 - ABZR86_RS21230 0.43 -0.1 214,662 + ABZR86_RS21230 0.46 -0.2 214,662 + ABZR86_RS21230 0.46 -0.3 214,663 - ABZR86_RS21230 0.46 +0.6 214,663 - ABZR86_RS21230 0.46 -1.3 214,665 + ABZR86_RS21230 0.47 -1.0 214,677 + ABZR86_RS21230 0.50 -0.1 214,678 - ABZR86_RS21230 0.50 +0.6
Or see this region's nucleotide sequence