Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_920

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
1,043,780	+				+0.3
1,043,781	-				+1.0
1,043,794	-				+0.8
1,043,794	-				+0.0
1,043,794	-				+2.9
1,043,817	+				+1.4
1,043,818	-				-0.5
1,043,818	-				-1.3
1,043,818	-				+0.3
1,043,818	-				-1.0
1,043,993	-		Pf1N1B4_918	0.22	-0.5
1,044,051	+		Pf1N1B4_918	0.31	-1.1
1,044,058	+		Pf1N1B4_918	0.32	+0.0
1,044,059	-		Pf1N1B4_918	0.32	+0.8
1,044,059	-		Pf1N1B4_918	0.32	+0.6
1,044,059	-		Pf1N1B4_918	0.32	+1.2
1,044,059	-		Pf1N1B4_918	0.32	+0.9
1,044,158	-		Pf1N1B4_918	0.47	+0.0
1,044,158	-		Pf1N1B4_918	0.47	+0.3
1,044,208	+		Pf1N1B4_918	0.54	-0.8
1,044,209	-		Pf1N1B4_918	0.55	-0.5
1,044,209	-		Pf1N1B4_918	0.55	+0.8
1,044,253	+		Pf1N1B4_918	0.61	+0.0
1,044,253	+		Pf1N1B4_918	0.61	-0.2
1,044,254	-		Pf1N1B4_918	0.61	+1.5
1,044,254	-		Pf1N1B4_918	0.61	+1.0
1,044,254	-		Pf1N1B4_918	0.61	-1.1
1,044,254	-		Pf1N1B4_918	0.61	+1.4
1,044,270	+		Pf1N1B4_918	0.64	+1.5
1,044,270	+		Pf1N1B4_918	0.64	-2.7
1,044,271	-		Pf1N1B4_918	0.64	+0.1
1,044,271	-		Pf1N1B4_918	0.64	-0.3
1,044,348	+				+1.0
1,044,348	+		Pf1N1B4_918	0.76	-1.0
1,044,349	-		Pf1N1B4_918	0.76	-0.1
1,044,394	-		Pf1N1B4_918	0.83	-2.4
1,044,397	+		Pf1N1B4_918	0.83	-1.1
1,044,397	+		Pf1N1B4_918	0.83	-0.7
1,044,397	+		Pf1N1B4_918	0.83	-0.3
1,044,397	+		Pf1N1B4_918	0.83	-0.7
1,044,398	-		Pf1N1B4_918	0.83	+0.5
1,044,398	-		Pf1N1B4_918	0.83	+1.5
1,044,398	-		Pf1N1B4_918	0.83	-1.8
1,044,398	-		Pf1N1B4_918	0.83	+0.5
1,044,398	-		Pf1N1B4_918	0.83	-1.0
1,044,398	-		Pf1N1B4_918	0.83	+0.2
1,044,398	-		Pf1N1B4_918	0.83	-1.3
1,044,398	-		Pf1N1B4_918	0.83	-1.0
1,044,398	-		Pf1N1B4_918	0.83	-1.0
1,044,398	-		Pf1N1B4_918	0.83	-0.5
1,044,398	-		Pf1N1B4_918	0.83	+1.0
1,044,398	-				+0.0
1,044,398	-		Pf1N1B4_918	0.83	+0.0
1,044,512	-				+3.4
1,044,512	-				+0.7
1,044,532	-				+0.8
1,044,532	-				+1.4
1,044,554	+				+0.6
1,044,554	+				-0.1
1,044,554	+				+0.9
1,044,555	-				-0.1
1,044,555	-				+0.7
1,044,555	-				-1.7
1,044,555	-				+1.0
1,044,555	-				+1.3
1,044,555	-				-0.5
1,044,568	+				+1.6
1,044,569	-				-0.5
1,044,569	-				-0.2
1,044,569	-				+2.0
1,044,569	-				-0.5
1,044,570	+				+0.0
1,044,571	-				+0.5
1,044,571	-				-0.0
1,044,571	-				+1.9
1,044,571	-				+0.5
1,044,571	-				+2.3
1,044,571	-				+3.6
1,044,628	-		Pf1N1B4_919	0.40	+1.9
1,044,628	-		Pf1N1B4_919	0.40	+0.4
1,044,675	+		Pf1N1B4_919	0.65	+0.5
1,044,675	+		Pf1N1B4_919	0.65	+0.6
1,044,974	-		Pf1N1B4_920	0.17	-0.1
1,045,123	+		Pf1N1B4_920	0.28	+1.6
1,045,123	+		Pf1N1B4_920	0.28	+1.3
1,045,123	+		Pf1N1B4_920	0.28	+1.4
1,045,124	-		Pf1N1B4_920	0.28	+0.4
1,045,124	-		Pf1N1B4_920	0.28	+1.2
1,045,124	-		Pf1N1B4_920	0.28	-0.3
1,045,210	+		Pf1N1B4_920	0.35	-0.1
1,045,210	+		Pf1N1B4_920	0.35	+0.6
1,045,210	+		Pf1N1B4_920	0.35	+0.5
1,045,210	+		Pf1N1B4_920	0.35	-1.5
1,045,210	+		Pf1N1B4_920	0.35	+1.4
1,045,210	+		Pf1N1B4_920	0.35	-0.2
1,045,210	+				+1.6
1,045,211	-		Pf1N1B4_920	0.35	+0.9
1,045,211	-		Pf1N1B4_920	0.35	+1.8
1,045,211	-		Pf1N1B4_920	0.35	+1.6
1,045,211	-		Pf1N1B4_920	0.35	+3.4
1,045,591	+		Pf1N1B4_920	0.63	-1.5
1,045,591	+		Pf1N1B4_920	0.63	+1.3
1,045,591	+		Pf1N1B4_920	0.63	+0.9
1,045,591	+		Pf1N1B4_920	0.63	-0.7
1,045,591	+		Pf1N1B4_920	0.63	-0.8
1,045,591	+		Pf1N1B4_920	0.63	+0.8
1,045,591	+				-0.5
1,045,591	+		Pf1N1B4_920	0.63	+1.7
1,045,591	+		Pf1N1B4_920	0.63	+2.0
1,045,592	-		Pf1N1B4_920	0.63	+1.6
1,045,592	-		Pf1N1B4_920	0.63	+0.2
1,045,592	-		Pf1N1B4_920	0.63	+0.3
1,045,592	-		Pf1N1B4_920	0.63	+0.1
1,045,615	+		Pf1N1B4_920	0.65	+0.9
1,045,615	+		Pf1N1B4_920	0.65	+1.0
1,045,615	+		Pf1N1B4_920	0.65	+0.9
1,045,615	+		Pf1N1B4_920	0.65	-1.8
1,045,616	-		Pf1N1B4_920	0.65	+1.0
1,045,616	-		Pf1N1B4_920	0.65	+1.0
1,045,616	-		Pf1N1B4_920	0.65	+1.0
1,045,616	-		Pf1N1B4_920	0.65	+2.0
1,045,627	+		Pf1N1B4_920	0.66	+2.6
1,045,627	+		Pf1N1B4_920	0.66	+1.0
1,045,628	-		Pf1N1B4_920	0.66	+2.3
1,045,715	+		Pf1N1B4_920	0.73	-0.8
1,045,715	+		Pf1N1B4_920	0.73	+0.7
1,045,716	-		Pf1N1B4_920	0.73	-2.0
1,045,716	-		Pf1N1B4_920	0.73	+0.8
1,045,716	-		Pf1N1B4_920	0.73	+0.9
1,045,716	-		Pf1N1B4_920	0.73	+0.5
1,045,903	+		Pf1N1B4_920	0.87	-0.4
1,045,903	+		Pf1N1B4_920	0.87	+2.0
1,045,903	+		Pf1N1B4_920	0.87	-1.3
1,045,903	+		Pf1N1B4_920	0.87	+0.8
1,045,904	-		Pf1N1B4_920	0.87	+0.7
1,045,904	-		Pf1N1B4_920	0.87	+1.0
1,045,904	-		Pf1N1B4_920	0.87	+1.4
1,045,982	-				+1.0
1,046,191	-				+1.0
1,046,234	+				-1.5
1,046,234	+				+0.9
1,046,235	-				-0.7
1,046,235	-				+1.2
1,046,235	-				+0.5
1,046,235	-				-0.5
1,046,235	-				-1.9
1,046,390	+		Pf1N1B4_921	0.18	+0.2
1,046,390	+		Pf1N1B4_921	0.18	+0.6
1,046,390	+		Pf1N1B4_921	0.18	-2.4
1,046,390	+		Pf1N1B4_921	0.18	-2.0
1,046,391	-		Pf1N1B4_921	0.18	-1.8
1,046,391	-		Pf1N1B4_921	0.18	+1.8
1,046,391	-		Pf1N1B4_921	0.18	-0.5
1,046,391	-		Pf1N1B4_921	0.18	+1.2
1,046,420	+		Pf1N1B4_921	0.21	+1.0
1,046,421	-		Pf1N1B4_921	0.21	-1.2
1,046,421	-		Pf1N1B4_921	0.21	-0.2
1,046,421	-		Pf1N1B4_921	0.21	+0.5
1,046,421	-		Pf1N1B4_921	0.21	+0.3
1,046,421	-		Pf1N1B4_921	0.21	-0.4
1,046,441	+		Pf1N1B4_921	0.23	-1.0
1,046,441	+		Pf1N1B4_921	0.23	+0.3
1,046,442	-		Pf1N1B4_921	0.24	+0.4
1,046,442	-				+0.0
1,046,655	-		Pf1N1B4_921	0.46	-1.3
1,046,655	-		Pf1N1B4_921	0.46	+0.6
1,046,655	-		Pf1N1B4_921	0.46	+1.0
1,046,655	-		Pf1N1B4_921	0.46	+1.5
1,046,693	+		Pf1N1B4_921	0.50	+0.3
1,046,954	+		Pf1N1B4_921	0.78	+1.6