Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5661

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
92,068	+		Pf1N1B4_5660	0.64	+1.3
92,071	+		Pf1N1B4_5660	0.64	-1.8
92,071	+		Pf1N1B4_5660	0.64	-0.5
92,071	+				-0.2
92,071	+		Pf1N1B4_5660	0.64	+0.8
92,071	+		Pf1N1B4_5660	0.64	-1.7
92,072	-		Pf1N1B4_5660	0.64	+0.4
92,072	-		Pf1N1B4_5660	0.64	+1.8
92,072	-		Pf1N1B4_5660	0.64	+0.6
92,072	-		Pf1N1B4_5660	0.64	-0.1
92,191	+		Pf1N1B4_5660	0.69	-0.0
92,191	+		Pf1N1B4_5660	0.69	+0.1
92,191	+		Pf1N1B4_5660	0.69	+0.8
92,192	-		Pf1N1B4_5660	0.70	+0.2
92,368	+		Pf1N1B4_5660	0.77	+0.8
92,414	+		Pf1N1B4_5660	0.79	+0.2
92,594	-				+1.8
92,635	+				-0.2
92,680	+				+1.5
92,753	-				+3.3
92,848	-				+0.0
92,888	+				-2.0
92,889	-				+0.2
93,124	+				+0.5
93,140	+				+0.3
93,141	-				+0.1
93,141	-				-0.1
93,141	-				+0.5
93,141	-				-0.2
93,161	+				+1.4
93,366	+				+0.5
93,367	-				+3.1
93,539	+		Pf1N1B4_5661	0.13	-0.6
93,902	+		Pf1N1B4_5661	0.23	-1.5
94,190	+		Pf1N1B4_5661	0.31	+1.2
94,190	+		Pf1N1B4_5661	0.31	+0.8
94,190	+		Pf1N1B4_5661	0.31	+1.8
94,190	+		Pf1N1B4_5661	0.31	-1.0
94,191	-		Pf1N1B4_5661	0.31	-1.2
94,191	-		Pf1N1B4_5661	0.31	+0.8
94,575	+		Pf1N1B4_5661	0.41	+0.2
94,576	-		Pf1N1B4_5661	0.41	-1.5
94,664	+		Pf1N1B4_5661	0.44	+1.4
94,664	+		Pf1N1B4_5661	0.44	+1.3
94,664	+				+0.2
94,665	-				-2.0
94,665	-				+0.4
94,808	+		Pf1N1B4_5661	0.48	-0.8
94,808	+		Pf1N1B4_5661	0.48	+0.8
94,808	+		Pf1N1B4_5661	0.48	+2.4
94,809	-		Pf1N1B4_5661	0.48	+0.2
94,809	-		Pf1N1B4_5661	0.48	+1.8
94,865	+		Pf1N1B4_5661	0.49	-0.2
94,865	+				+1.2
94,865	+		Pf1N1B4_5661	0.49	+1.2
94,865	+		Pf1N1B4_5661	0.49	+0.3
94,865	+		Pf1N1B4_5661	0.49	+0.1
94,866	-		Pf1N1B4_5661	0.49	+0.8
94,866	-		Pf1N1B4_5661	0.49	+1.3
94,866	-		Pf1N1B4_5661	0.49	-0.0
94,866	-		Pf1N1B4_5661	0.49	-0.9
94,866	-		Pf1N1B4_5661	0.49	+1.8
94,964	+		Pf1N1B4_5661	0.52	+1.5
94,964	+		Pf1N1B4_5661	0.52	-0.0
94,964	+		Pf1N1B4_5661	0.52	+0.6
94,964	+		Pf1N1B4_5661	0.52	+1.2
94,965	-		Pf1N1B4_5661	0.52	+1.8
94,965	-		Pf1N1B4_5661	0.52	+2.2
94,965	-		Pf1N1B4_5661	0.52	+0.8
94,965	-		Pf1N1B4_5661	0.52	+0.4
95,322	+		Pf1N1B4_5661	0.61	+0.8
95,322	+		Pf1N1B4_5661	0.61	+2.4
95,323	-		Pf1N1B4_5661	0.61	-0.4
95,323	-				+4.0
95,618	+		Pf1N1B4_5661	0.69	-0.2
95,619	-		Pf1N1B4_5661	0.69	-0.2
95,619	-				+3.8
95,711	+		Pf1N1B4_5661	0.72	+0.2
95,711	+		Pf1N1B4_5661	0.72	+1.4
95,711	+		Pf1N1B4_5661	0.72	+0.1
95,712	-				+0.8
95,885	+		Pf1N1B4_5661	0.77	+1.2
95,885	+		Pf1N1B4_5661	0.77	+0.5
96,224	+		Pf1N1B4_5661	0.86	+0.5
96,302	+		Pf1N1B4_5661	0.88	+0.8
96,302	+		Pf1N1B4_5661	0.88	+0.8
96,302	+		Pf1N1B4_5661	0.88	+0.3
96,379	+		Pf1N1B4_5661	0.90	+3.1
96,386	+				+1.7
96,386	+				-1.0
96,386	+				+2.4
96,443	+				+0.6
96,443	+				-0.2
96,443	+				+3.4
96,443	+				+2.7
96,443	+				+0.2
96,443	+				-0.8
96,443	+				+0.8
96,444	-				+1.0
96,444	-				+0.2
96,444	-				+1.4
96,444	-				-0.2
96,578	+				+0.9
96,614	+				-0.2
96,615	-				+1.0
96,615	-				+0.8
96,639	-				+2.0
96,680	+				+0.6
96,680	+				+2.4
96,680	+				+2.6
96,680	+				+2.1
96,680	+				+2.0
96,680	+				+0.8
96,680	+				+0.9
96,753	-				-0.4
96,868	+				+0.1
96,869	-				-1.5
96,869	-				+0.8
97,075	-		Pf1N1B4_5662	0.74	-0.0
97,444	+		Pf1N1B4_5663	0.30	-0.5
97,498	-		Pf1N1B4_5663	0.36	-0.2