Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4528

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,990,963	+				+0.0
4,990,964	-				+0.6
4,990,978	-				-0.6
4,990,978	-				+0.3
4,991,105	-				-1.7
4,991,105	-				+1.6
4,991,204	+				-0.5
4,991,205	-				-0.7
4,991,228	+				+1.1
4,991,228	+				-0.9
4,991,228	+				-0.9
4,991,228	+				+0.8
4,991,229	-				+0.3
4,991,318	-		Pf1N1B4_4527	0.21	+0.6
4,991,444	+		Pf1N1B4_4527	0.37	-1.7
4,991,444	+		Pf1N1B4_4527	0.37	+0.4
4,991,444	+		Pf1N1B4_4527	0.37	+1.5
4,991,445	-				+0.6
4,991,445	-				+1.6
4,991,445	-				-1.7
4,991,445	-		Pf1N1B4_4527	0.37	+0.1
4,991,472	+		Pf1N1B4_4527	0.41	+0.6
4,991,472	+				-0.4
4,991,473	-		Pf1N1B4_4527	0.41	+0.4
4,992,062	+		Pf1N1B4_4528	0.10	-0.1
4,992,062	+		Pf1N1B4_4528	0.10	+0.9
4,992,063	-		Pf1N1B4_4528	0.11	+1.1
4,992,063	-		Pf1N1B4_4528	0.11	+0.9
4,992,101	+				+0.6
4,992,107	+		Pf1N1B4_4528	0.15	+0.6
4,992,108	-		Pf1N1B4_4528	0.15	-1.7
4,992,110	+		Pf1N1B4_4528	0.15	+0.6
4,992,111	-				+1.6
4,992,152	+		Pf1N1B4_4528	0.19	-0.1
4,992,447	+				+3.2
4,992,512	+		Pf1N1B4_4528	0.53	-1.7
4,992,555	-		Pf1N1B4_4528	0.57	-0.4
4,992,686	+		Pf1N1B4_4528	0.69	+1.6
4,992,728	+		Pf1N1B4_4528	0.73	-0.4
4,992,728	+		Pf1N1B4_4528	0.73	-1.4
4,992,729	-		Pf1N1B4_4528	0.73	+0.8
4,992,729	-		Pf1N1B4_4528	0.73	+1.2
4,993,008	+				-0.4
4,993,030	+				-1.2
4,993,065	+				-0.4
4,993,106	+				-0.4
4,993,106	+				-0.9
4,993,106	+				-1.4
4,993,106	+				+1.1
4,993,106	+				-0.1
4,993,107	-				-1.9
4,993,107	-				+1.1
4,993,107	-				+1.1
4,993,167	-				-0.1
4,993,273	-		Pf1N1B4_4529	0.16	-1.5
4,993,739	+				-0.8
4,993,868	-				+1.1
4,993,868	-				-0.9