Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4515

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,976,020	+				+0.4
4,976,246	+		Pf1N1B4_4514	0.24	+2.2
4,976,249	+		Pf1N1B4_4514	0.24	+0.9
4,976,249	+		Pf1N1B4_4514	0.24	-0.7
4,976,250	-		Pf1N1B4_4514	0.24	-1.7
4,976,250	-		Pf1N1B4_4514	0.24	-0.4
4,976,274	-		Pf1N1B4_4514	0.28	+0.1
4,976,274	-		Pf1N1B4_4514	0.28	-0.9
4,976,565	+				-0.9
4,976,567	+		Pf1N1B4_4514	0.75	-0.5
4,976,567	+		Pf1N1B4_4514	0.75	+0.1
4,976,567	+		Pf1N1B4_4514	0.75	+0.1
4,976,567	+		Pf1N1B4_4514	0.75	-0.2
4,976,567	+		Pf1N1B4_4514	0.75	-0.4
4,976,567	+		Pf1N1B4_4514	0.75	+0.6
4,976,568	-				-0.4
4,976,568	-		Pf1N1B4_4514	0.76	+0.3
4,976,568	-		Pf1N1B4_4514	0.76	-1.1
4,976,620	+		Pf1N1B4_4514	0.84	-0.5
4,976,621	-		Pf1N1B4_4514	0.84	-1.2
4,976,984	-				+1.6
4,976,984	-		Pf1N1B4_4515	0.12	-0.7
4,976,984	-		Pf1N1B4_4515	0.12	-0.7
4,976,988	-		Pf1N1B4_4515	0.12	-0.4
4,976,988	-		Pf1N1B4_4515	0.12	-0.1
4,977,036	-		Pf1N1B4_4515	0.16	+0.6
4,977,106	+		Pf1N1B4_4515	0.21	-1.1
4,977,107	-		Pf1N1B4_4515	0.22	-0.7
4,977,122	-				+1.6
4,977,262	-		Pf1N1B4_4515	0.34	-1.4
4,977,607	+				+0.6
4,977,607	+		Pf1N1B4_4515	0.61	-1.4
4,977,608	-				+0.6
4,977,608	-		Pf1N1B4_4515	0.61	-2.2
4,977,641	-		Pf1N1B4_4515	0.63	+0.6
4,977,898	-		Pf1N1B4_4515	0.84	-0.4
4,978,022	-				+0.8
4,978,108	+				-1.7
4,978,109	-				+2.2
4,978,109	-				-1.4
4,978,225	+				-0.5
4,978,512	+		Pf1N1B4_4516	0.30	-0.1
4,978,512	+		Pf1N1B4_4516	0.30	+0.5
4,978,512	+		Pf1N1B4_4516	0.30	+0.3
4,978,512	+		Pf1N1B4_4516	0.30	+0.6
4,978,513	-		Pf1N1B4_4516	0.30	-0.8
4,978,702	+		Pf1N1B4_4516	0.43	-2.8
4,978,703	-				-1.4