Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4314

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,773,571	+				-0.9
4,774,039	+		Pf1N1B4_4313	0.68	+0.7
4,774,039	+				-0.9
4,774,039	+		Pf1N1B4_4313	0.68	+1.5
4,774,040	-		Pf1N1B4_4313	0.68	+0.3
4,774,040	-		Pf1N1B4_4313	0.68	-1.3
4,774,040	-		Pf1N1B4_4313	0.68	-0.6
4,774,040	-				+1.5
4,774,131	+		Pf1N1B4_4313	0.81	+0.7
4,774,131	+		Pf1N1B4_4313	0.81	+0.6
4,774,131	+		Pf1N1B4_4313	0.81	-1.6
4,774,132	-				+0.7
4,774,132	-		Pf1N1B4_4313	0.81	-0.6
4,774,182	+		Pf1N1B4_4313	0.88	-1.3
4,774,182	+		Pf1N1B4_4313	0.88	+0.5
4,774,183	-		Pf1N1B4_4313	0.88	-1.6
4,774,183	-		Pf1N1B4_4313	0.88	-2.1
4,774,183	-		Pf1N1B4_4313	0.88	+2.3
4,774,231	+				-0.6
4,774,231	+				+0.2
4,774,231	+				-0.9
4,774,232	-				-0.3
4,774,232	-				-0.9
4,774,232	-				-1.3
4,774,232	-				-0.9
4,774,281	+				+1.1
4,774,293	+				-0.1
4,774,293	+				-0.3
4,774,360	+				+0.0
4,774,361	-				+0.0
4,774,362	+				-2.6
4,774,362	+				+0.6
4,774,363	-				+0.7
4,774,462	+				+1.3
4,774,462	+				-1.3
4,774,462	+				-0.9
4,774,462	+				+0.7
4,774,462	+				+1.1
4,774,463	-				-0.1
4,774,523	+				+0.0
4,774,649	+				-1.1
4,775,016	-		Pf1N1B4_4314	0.20	-0.2
4,775,237	+		Pf1N1B4_4314	0.28	-0.6
4,775,238	-		Pf1N1B4_4314	0.28	-1.1
4,775,481	-		Pf1N1B4_4314	0.37	+0.8
4,775,481	-		Pf1N1B4_4314	0.37	+1.2
4,775,481	-		Pf1N1B4_4314	0.37	-1.6
4,775,481	-		Pf1N1B4_4314	0.37	-0.2
4,775,483	+		Pf1N1B4_4314	0.37	+0.6
4,775,483	+		Pf1N1B4_4314	0.37	+0.2
4,775,483	+		Pf1N1B4_4314	0.37	-1.3
4,775,484	-		Pf1N1B4_4314	0.37	-2.5
4,775,484	-				+0.7
4,775,484	-				-0.3
4,775,484	-		Pf1N1B4_4314	0.37	-2.3
4,775,565	+		Pf1N1B4_4314	0.40	+0.7
4,775,590	-		Pf1N1B4_4314	0.41	+0.4
4,775,693	+		Pf1N1B4_4314	0.45	+0.7
4,775,693	+		Pf1N1B4_4314	0.45	+0.1
4,775,693	+		Pf1N1B4_4314	0.45	+1.7
4,775,694	-		Pf1N1B4_4314	0.45	-0.3
4,775,694	-		Pf1N1B4_4314	0.45	+0.7
4,775,694	-		Pf1N1B4_4314	0.45	-0.5
4,775,897	+		Pf1N1B4_4314	0.53	+0.7
4,775,898	-		Pf1N1B4_4314	0.53	-0.4
4,776,323	+		Pf1N1B4_4314	0.69	-0.5
4,776,324	-		Pf1N1B4_4314	0.69	-0.1
4,776,324	-		Pf1N1B4_4314	0.69	+1.1
4,776,326	+		Pf1N1B4_4314	0.69	+1.5
4,776,326	+		Pf1N1B4_4314	0.69	+0.7
4,776,349	-		Pf1N1B4_4314	0.70	+0.1
4,776,869	-				-0.3
4,776,869	-				+3.3
4,776,910	+				+2.0
4,776,911	-				-0.6
4,776,911	-				-0.3
4,777,124	+				-1.3
4,777,172	-				+1.9
4,777,447	-				+0.7
4,777,580	-				-2.0
4,777,641	+				-1.6
4,777,872	+		Pf1N1B4_4316	0.62	-1.2
4,777,873	-		Pf1N1B4_4316	0.62	-0.3
4,778,079	-				-0.7
4,778,087	-				-0.8