Experiment: Carbenicillin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf1N1B4_4134 - Na+ driven multidrug efflux pump, at 4,574,954 to 4,576,312
_4134
Position (kb)
4574
4575
4576
4577 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4573.966 kb on - strand at 4574.082 kb on + strand at 4574.083 kb on - strand at 4574.083 kb on - strand at 4574.083 kb on - strand at 4574.239 kb on - strand at 4574.357 kb on + strand at 4574.357 kb on + strand at 4574.358 kb on - strand at 4574.488 kb on + strand at 4574.548 kb on + strand at 4574.656 kb on + strand at 4574.713 kb on + strand at 4574.713 kb on + strand at 4574.713 kb on + strand at 4574.713 kb on + strand at 4574.713 kb on + strand at 4574.713 kb on + strand at 4574.714 kb on - strand at 4574.718 kb on + strand at 4574.719 kb on - strand at 4574.719 kb on - strand at 4574.881 kb on + strand at 4574.881 kb on + strand at 4574.882 kb on - strand at 4574.911 kb on + strand at 4574.911 kb on + strand at 4574.911 kb on + strand at 4574.993 kb on + strand at 4575.065 kb on + strand at 4575.066 kb on - strand at 4575.066 kb on - strand at 4575.066 kb on - strand at 4575.066 kb on - strand at 4575.407 kb on - strand, within Pf1N1B4_4134 at 4575.815 kb on + strand, within Pf1N1B4_4134 at 4575.815 kb on + strand, within Pf1N1B4_4134 at 4575.968 kb on + strand, within Pf1N1B4_4134 at 4576.265 kb on + strand at 4576.265 kb on + strand at 4576.266 kb on - strand at 4576.518 kb on + strand at 4576.544 kb on + strand at 4576.545 kb on - strand at 4576.691 kb on + strand at 4576.691 kb on + strand at 4576.692 kb on - strand at 4576.692 kb on - strand at 4576.736 kb on + strand at 4576.737 kb on - strand at 4576.769 kb on - strand at 4576.771 kb on + strand at 4576.772 kb on - strand at 4576.906 kb on - strand at 4576.968 kb on + strand at 4576.968 kb on + strand at 4576.968 kb on + strand at 4577.145 kb on + strand at 4577.156 kb on + strand at 4577.218 kb on - strand at 4577.220 kb on + strand at 4577.230 kb on + strand at 4577.230 kb on + strand at 4577.232 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 2 mg/ml remove 4,573,966 - -0.1 4,574,082 + -0.4 4,574,083 - -0.3 4,574,083 - -0.7 4,574,083 - -0.3 4,574,239 - +0.4 4,574,357 + -0.1 4,574,357 + -1.9 4,574,358 - -1.9 4,574,488 + +0.1 4,574,548 + -0.5 4,574,656 + +0.7 4,574,713 + -0.3 4,574,713 + +0.3 4,574,713 + -0.9 4,574,713 + -0.0 4,574,713 + -1.6 4,574,713 + -1.9 4,574,714 - -0.3 4,574,718 + +2.3 4,574,719 - -0.9 4,574,719 - -0.4 4,574,881 + +2.9 4,574,881 + +1.0 4,574,882 - +0.7 4,574,911 + +1.7 4,574,911 + -0.6 4,574,911 + -0.3 4,574,993 + +1.4 4,575,065 + -0.9 4,575,066 - -0.9 4,575,066 - +1.1 4,575,066 - +1.2 4,575,066 - +0.1 4,575,407 - Pf1N1B4_4134 0.33 +0.1 4,575,815 + Pf1N1B4_4134 0.63 -0.6 4,575,815 + Pf1N1B4_4134 0.63 -0.9 4,575,968 + Pf1N1B4_4134 0.75 -1.3 4,576,265 + -0.5 4,576,265 + -0.3 4,576,266 - -0.9 4,576,518 + -0.8 4,576,544 + -1.1 4,576,545 - -0.6 4,576,691 + -1.3 4,576,691 + -0.1 4,576,692 - +0.4 4,576,692 - -0.5 4,576,736 + +1.3 4,576,737 - +0.3 4,576,769 - -0.9 4,576,771 + +0.7 4,576,772 - -0.3 4,576,906 - +0.1 4,576,968 + -0.9 4,576,968 + +0.1 4,576,968 + +0.3 4,577,145 + +1.5 4,577,156 + -1.9 4,577,218 - +0.5 4,577,220 + -0.0 4,577,230 + +1.5 4,577,230 + +0.1 4,577,232 + -0.3
Or see this region's nucleotide sequence