Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3950

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,389,127	+				-1.2
4,389,128	-				+0.9
4,389,166	-				-1.0
4,389,173	+				-2.1
4,389,174	-				-0.8
4,389,174	-				-0.2
4,389,346	+		Pf1N1B4_3950	0.10	+0.8
4,389,346	+		Pf1N1B4_3950	0.10	-0.8
4,389,347	-		Pf1N1B4_3950	0.10	-0.2
4,389,451	+				-0.2
4,389,630	+		Pf1N1B4_3950	0.44	+0.5
4,389,630	+		Pf1N1B4_3950	0.44	+1.2
4,389,631	-		Pf1N1B4_3950	0.44	-0.7
4,389,656	+		Pf1N1B4_3950	0.47	+0.3
4,389,657	-				+1.8
4,389,657	-		Pf1N1B4_3950	0.47	+1.0
4,389,742	+				-0.2
4,389,743	-		Pf1N1B4_3950	0.57	+1.5
4,390,031	+				-0.5
4,390,031	+				+0.0
4,390,031	+				-0.0
4,390,105	+				+0.5
4,390,188	+				-1.8
4,390,189	-				-1.4
4,390,194	+				-0.3
4,390,194	+				+2.4
4,390,242	-				+0.8
4,390,264	-				-2.4
4,390,269	-				+0.2
4,390,269	-				+0.4
4,390,269	-				-0.4
4,390,327	-		Pf1N1B4_3951	0.31	+0.8
4,390,361	+		Pf1N1B4_3951	0.50	-1.5
4,390,365	-				+1.8
4,390,365	-		Pf1N1B4_3951	0.52	-0.2