Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3927

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,365,439	+		Pf1N1B4_3926	0.23	+0.8
4,365,439	+		Pf1N1B4_3926	0.23	+1.6
4,365,440	-		Pf1N1B4_3926	0.23	-0.8
4,365,470	+		Pf1N1B4_3926	0.26	+1.3
4,365,542	+		Pf1N1B4_3926	0.32	-0.5
4,365,551	+		Pf1N1B4_3926	0.33	+0.8
4,365,705	-				-0.2
4,365,754	-		Pf1N1B4_3926	0.52	-2.5
4,365,766	-		Pf1N1B4_3926	0.54	+0.3
4,366,105	+		Pf1N1B4_3926	0.85	+0.3
4,366,118	+		Pf1N1B4_3926	0.87	+0.3
4,366,118	+		Pf1N1B4_3926	0.87	-0.1
4,366,355	+		Pf1N1B4_3927	0.55	-0.8
4,366,355	+				-0.8
4,366,437	+				-0.2
4,366,441	+				-0.7
4,366,441	+				+0.5
4,366,442	-				+0.2
4,366,455	+				-0.8
4,366,455	+				-0.8
4,366,463	+				-0.8
4,366,464	-				+0.8
4,366,464	-				+0.1
4,366,550	+				-2.8
4,366,550	+				+0.8
4,366,561	+				-0.8
4,366,561	+		Pf1N1B4_3928	0.12	-0.5
4,366,561	+				-0.2
4,366,561	+		Pf1N1B4_3928	0.12	-1.5
4,366,561	+		Pf1N1B4_3928	0.12	-0.4
4,366,562	-		Pf1N1B4_3928	0.12	+0.4
4,366,562	-		Pf1N1B4_3928	0.12	+1.0
4,366,562	-		Pf1N1B4_3928	0.12	-0.8
4,366,562	-		Pf1N1B4_3928	0.12	-0.9
4,366,677	+		Pf1N1B4_3928	0.71	-0.0
4,366,678	-		Pf1N1B4_3928	0.72	+1.1
4,366,751	+				+0.3
4,366,752	-				+1.0
4,366,752	-				+0.8
4,366,802	+				+0.2
4,366,802	+				+0.1
4,366,802	+				+0.8
4,366,802	+				-0.8
4,366,802	+				-1.3
4,366,802	+				-1.0
4,366,803	-				+0.8
4,366,803	-				-0.2
4,366,803	-				+0.0
4,366,806	+				-0.2
4,366,806	+				-1.4
4,366,806	+				+0.6
4,366,806	+				+2.1
4,366,806	+				-0.5
4,366,806	+				+1.5
4,366,807	-				+0.3
4,366,807	-				-0.4
4,366,807	-				-1.4
4,366,807	-				-2.2
4,366,858	+				-2.0
4,366,904	+				-1.5
4,366,904	+				-0.2
4,366,950	-				-0.8
4,366,950	-				-0.2
4,367,006	+		Pf1N1B4_3929	0.21	-0.2
4,367,007	-		Pf1N1B4_3929	0.21	+1.0
4,367,007	-		Pf1N1B4_3929	0.21	+0.2
4,367,009	+		Pf1N1B4_3929	0.22	-0.8
4,367,009	+		Pf1N1B4_3929	0.22	+0.8
4,367,009	+		Pf1N1B4_3929	0.22	-0.1
4,367,009	+		Pf1N1B4_3929	0.22	-1.5
4,367,010	-		Pf1N1B4_3929	0.22	-0.5
4,367,027	+		Pf1N1B4_3929	0.27	+1.4
4,367,030	+		Pf1N1B4_3929	0.27	-0.8
4,367,030	+		Pf1N1B4_3929	0.27	-1.2
4,367,030	+		Pf1N1B4_3929	0.27	-0.7
4,367,030	+		Pf1N1B4_3929	0.27	-1.5
4,367,031	-		Pf1N1B4_3929	0.28	+1.8
4,367,031	-		Pf1N1B4_3929	0.28	-0.1
4,367,031	-		Pf1N1B4_3929	0.28	+0.1
4,367,031	-		Pf1N1B4_3929	0.28	-2.0
4,367,048	+		Pf1N1B4_3929	0.32	+0.8
4,367,049	-		Pf1N1B4_3929	0.33	+0.8
4,367,067	-		Pf1N1B4_3929	0.37	+0.8
4,367,070	-		Pf1N1B4_3929	0.38	-0.2
4,367,070	-		Pf1N1B4_3929	0.38	-0.4
4,367,086	+		Pf1N1B4_3929	0.42	+0.4
4,367,090	+		Pf1N1B4_3929	0.43	+0.8
4,367,090	+		Pf1N1B4_3929	0.43	-2.0
4,367,091	-		Pf1N1B4_3929	0.44	-0.7
4,367,091	-		Pf1N1B4_3929	0.44	-2.5
4,367,091	-		Pf1N1B4_3929	0.44	-1.0
4,367,091	-		Pf1N1B4_3929	0.44	-0.5
4,367,091	-		Pf1N1B4_3929	0.44	+0.2
4,367,112	-		Pf1N1B4_3929	0.49	-0.6
4,367,112	-		Pf1N1B4_3929	0.49	+1.6
4,367,129	+		Pf1N1B4_3929	0.54	+0.8
4,367,129	+		Pf1N1B4_3929	0.54	-0.5
4,367,129	+		Pf1N1B4_3929	0.54	-0.4
4,367,129	+		Pf1N1B4_3929	0.54	-0.6
4,367,129	+		Pf1N1B4_3929	0.54	-0.2
4,367,129	+		Pf1N1B4_3929	0.54	+0.1
4,367,130	-		Pf1N1B4_3929	0.54	-0.0
4,367,130	-		Pf1N1B4_3929	0.54	-0.2
4,367,130	-		Pf1N1B4_3929	0.54	+1.5
4,367,130	-		Pf1N1B4_3929	0.54	-1.0
4,367,130	-		Pf1N1B4_3929	0.54	-1.0
4,367,130	-		Pf1N1B4_3929	0.54	+0.7
4,367,130	-				+0.8
4,367,130	-		Pf1N1B4_3929	0.54	+1.3
4,367,130	-		Pf1N1B4_3929	0.54	-0.1
4,367,153	-		Pf1N1B4_3929	0.60	+0.1
4,367,278	+				-1.7
4,367,292	+				+1.8
4,367,304	+				+1.4
4,367,304	+				-0.4
4,367,304	+				+1.7
4,367,304	+				-0.2
4,367,304	+				+0.4
4,367,304	+				+0.4
4,367,305	-				-0.8
4,367,305	-				-0.2
4,367,305	-				-2.0
4,367,305	-				+0.8
4,367,305	-				-0.2
4,367,305	-				-0.0
4,367,305	-				-0.7
4,367,344	-				-1.2
4,367,344	-				+0.8
4,367,366	-				-0.5
4,367,371	+				+1.8
4,367,371	+				-1.2
4,367,371	+				-0.8
4,367,371	+				+1.1
4,367,372	-				-0.6
4,367,372	-				+0.6