Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3898

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,326,243	+		Pf1N1B4_3896	0.58	-0.8
4,326,284	+				+1.6
4,326,284	+		Pf1N1B4_3896	0.60	+0.1
4,326,285	-				+0.8
4,326,371	+		Pf1N1B4_3896	0.65	+1.3
4,326,371	+		Pf1N1B4_3896	0.65	-0.8
4,326,371	+		Pf1N1B4_3896	0.65	-1.8
4,326,371	+		Pf1N1B4_3896	0.65	-0.4
4,326,371	+		Pf1N1B4_3896	0.65	+0.1
4,326,371	+		Pf1N1B4_3896	0.65	-0.9
4,326,372	-		Pf1N1B4_3896	0.65	-0.1
4,326,381	+		Pf1N1B4_3896	0.66	-0.8
4,326,381	+		Pf1N1B4_3896	0.66	+1.4
4,326,381	+				-1.2
4,326,392	+		Pf1N1B4_3896	0.66	+1.8
4,326,584	+		Pf1N1B4_3896	0.77	+0.1
4,326,926	+				-2.0
4,326,926	+				-1.5
4,326,926	+				-1.2
4,326,926	+				-0.2
4,326,926	+				-0.2
4,326,926	+				+2.1
4,326,926	+				-0.5
4,326,926	+				-0.8
4,326,926	+				-1.4
4,326,926	+				-0.6
4,326,986	+				-0.2
4,327,055	+				-0.8
4,327,056	-				+0.1
4,327,056	-				-0.2
4,327,210	-				-1.2
4,327,210	-				-1.2
4,327,216	+				-2.4
4,327,217	-				-0.2
4,327,231	+				-2.2
4,327,231	+				-1.2
4,327,282	+				-4.5
4,327,282	+				-3.1
4,327,282	+				-2.8
4,327,282	+				-0.2
4,327,283	-				-1.8
4,327,283	-				-0.6
4,327,283	-				-3.0
4,327,295	-				-3.6
4,327,315	+				-2.0
4,327,315	+				-2.0
4,327,315	+				+0.6
4,327,315	+				-1.9
4,327,315	+				-1.2
4,327,315	+				-3.7
4,327,315	+				-0.6
4,327,315	+				-2.9
4,327,315	+				-1.9
4,327,316	-				-5.0
4,327,316	-				-1.2
4,327,395	+				-2.2
4,327,395	+				-2.4
4,327,417	+		Pf1N1B4_3898	0.10	-1.8
4,327,418	-		Pf1N1B4_3898	0.11	-5.0
4,327,747	+				-1.2
4,327,748	-		Pf1N1B4_3898	0.28	-3.1
4,327,783	+		Pf1N1B4_3898	0.29	-0.8
4,327,783	+		Pf1N1B4_3898	0.29	-0.2
4,327,798	+		Pf1N1B4_3898	0.30	-2.0
4,327,914	+		Pf1N1B4_3898	0.36	-1.2
4,327,915	-		Pf1N1B4_3898	0.36	-1.8
4,327,925	+		Pf1N1B4_3898	0.37	-1.5
4,327,970	+				-0.8
4,327,970	+				-0.2
4,327,970	+		Pf1N1B4_3898	0.39	+0.8
4,327,971	-				-0.8
4,327,971	-		Pf1N1B4_3898	0.39	-1.0
4,327,971	-		Pf1N1B4_3898	0.39	-3.1
4,328,021	-		Pf1N1B4_3898	0.42	-0.8
4,328,050	+		Pf1N1B4_3898	0.43	-1.5
4,328,050	+		Pf1N1B4_3898	0.43	-0.6
4,328,164	+		Pf1N1B4_3898	0.49	-2.6
4,328,165	-		Pf1N1B4_3898	0.49	-2.0
4,328,165	-		Pf1N1B4_3898	0.49	-1.8
4,328,245	+		Pf1N1B4_3898	0.53	-1.5
4,328,245	+		Pf1N1B4_3898	0.53	-1.5
4,328,245	+		Pf1N1B4_3898	0.53	-0.8
4,328,256	+		Pf1N1B4_3898	0.54	-2.4
4,328,256	+		Pf1N1B4_3898	0.54	-1.6
4,328,256	+		Pf1N1B4_3898	0.54	-1.8
4,328,256	+		Pf1N1B4_3898	0.54	-2.4
4,328,256	+		Pf1N1B4_3898	0.54	-2.5
4,328,256	+		Pf1N1B4_3898	0.54	-1.8
4,328,256	+		Pf1N1B4_3898	0.54	-1.8
4,328,257	-		Pf1N1B4_3898	0.54	-1.2
4,328,257	-		Pf1N1B4_3898	0.54	-2.8
4,328,257	-		Pf1N1B4_3898	0.54	-2.4
4,328,563	+				-0.2
4,328,675	+				-0.8
4,328,675	+		Pf1N1B4_3898	0.76	-1.8
4,328,740	+		Pf1N1B4_3898	0.79	-1.8
4,328,740	+		Pf1N1B4_3898	0.79	-2.0
4,328,741	-				-1.2
4,328,788	+		Pf1N1B4_3898	0.82	+1.4
4,328,789	-				-1.2
4,328,789	-		Pf1N1B4_3898	0.82	-1.8
4,328,791	+		Pf1N1B4_3898	0.82	-2.0
4,328,791	+		Pf1N1B4_3898	0.82	-3.2
4,328,792	-		Pf1N1B4_3898	0.82	-1.4
4,328,792	-		Pf1N1B4_3898	0.82	-1.2
4,328,792	-		Pf1N1B4_3898	0.82	-0.8
4,328,792	-		Pf1N1B4_3898	0.82	-3.2
4,328,792	-		Pf1N1B4_3898	0.82	-1.8
4,328,944	+		Pf1N1B4_3898	0.90	+0.2
4,328,944	+		Pf1N1B4_3898	0.90	-2.9
4,328,945	-		Pf1N1B4_3898	0.90	-2.2
4,328,953	+				-0.8
4,328,953	+				+0.3
4,328,953	+				-1.8
4,328,953	+				-1.2
4,328,998	+				-0.8
4,328,998	+				-1.8
4,329,043	+				-2.0
4,329,046	+				-1.8
4,329,047	-				-1.8
4,329,101	+				-2.2
4,329,101	+				-2.6
4,329,101	+				-1.5
4,329,197	+				-1.2
4,329,197	+				-2.0
4,329,197	+				-1.8
4,329,203	+				-5.6
4,329,203	+				-2.5
4,329,203	+				-2.0
4,329,208	+				-0.2
4,329,208	+				-1.5
4,329,326	+				+1.1
4,329,326	+				-0.8
4,329,326	+				-1.2
4,329,326	+				-1.5
4,330,079	+		Pf1N1B4_3899	0.38	-0.8