Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3895

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,324,717	+				-1.5
4,324,731	-				+0.5
4,324,760	-				-0.2
4,324,760	-				+0.2
4,324,760	-				+0.8
4,324,762	-				-0.2
4,324,878	-		Pf1N1B4_3894	0.64	-0.4
4,324,971	+				-2.6
4,324,972	-				+0.5
4,324,972	-				+2.8
4,324,972	-				+0.4
4,324,972	-				+1.1
4,324,972	-				+2.4
4,324,972	-				-0.0
4,324,972	-				+0.5
4,324,976	+				+0.2
4,324,977	-				+0.6
4,324,977	-				-0.0
4,324,977	-				+1.5
4,324,977	-				-0.2
4,324,977	-				-0.3
4,324,977	-				+1.3
4,325,050	-				+0.3
4,325,082	+				-0.2
4,325,083	-				-0.6
4,325,096	+				+1.2
4,325,097	-				+0.2
4,325,111	+				+0.3
4,325,111	+				-0.5
4,325,111	+				-0.2
4,325,112	-				+0.8
4,325,112	-				+0.8
4,325,116	-				+0.5
4,325,128	+		Pf1N1B4_3895	0.12	+0.8
4,325,163	-		Pf1N1B4_3895	0.43	-0.2
4,325,163	-		Pf1N1B4_3895	0.43	+1.8
4,325,163	-		Pf1N1B4_3895	0.43	-0.4
4,325,163	-		Pf1N1B4_3895	0.43	+0.8
4,325,178	-		Pf1N1B4_3895	0.56	+0.2
4,325,178	-		Pf1N1B4_3895	0.56	+1.4
4,325,178	-		Pf1N1B4_3895	0.56	+2.0
4,325,178	-		Pf1N1B4_3895	0.56	+0.9
4,325,308	+				-0.8
4,325,308	+				-0.2
4,325,459	+		Pf1N1B4_3896	0.14	-2.0
4,325,460	-		Pf1N1B4_3896	0.14	+0.1
4,325,499	+		Pf1N1B4_3896	0.16	+0.2
4,325,499	+		Pf1N1B4_3896	0.16	-0.5
4,325,500	-		Pf1N1B4_3896	0.16	+1.3
4,325,500	-		Pf1N1B4_3896	0.16	-0.3
4,325,546	+		Pf1N1B4_3896	0.19	+2.2
4,325,546	+		Pf1N1B4_3896	0.19	-0.0
4,325,546	+		Pf1N1B4_3896	0.19	+2.4
4,325,546	+		Pf1N1B4_3896	0.19	-1.8
4,325,546	+				-0.8
4,325,547	-		Pf1N1B4_3896	0.19	+0.7
4,325,547	-		Pf1N1B4_3896	0.19	+0.1
4,325,547	-		Pf1N1B4_3896	0.19	-1.1
4,325,547	-		Pf1N1B4_3896	0.19	+2.8
4,325,547	-				+1.2
4,325,547	-		Pf1N1B4_3896	0.19	+0.2
4,325,645	-		Pf1N1B4_3896	0.24	+0.7
4,325,816	+		Pf1N1B4_3896	0.34	+0.5
4,325,816	+				+1.4
4,325,816	+		Pf1N1B4_3896	0.34	-1.2
4,325,816	+		Pf1N1B4_3896	0.34	-0.9
4,325,816	+		Pf1N1B4_3896	0.34	-0.6
4,325,816	+		Pf1N1B4_3896	0.34	-2.2
4,325,816	+		Pf1N1B4_3896	0.34	+0.1
4,325,816	+		Pf1N1B4_3896	0.34	-0.9
4,325,816	+		Pf1N1B4_3896	0.34	-2.2
4,325,817	-		Pf1N1B4_3896	0.34	+0.8
4,325,817	-		Pf1N1B4_3896	0.34	-1.2
4,325,817	-		Pf1N1B4_3896	0.34	+1.0
4,325,817	-		Pf1N1B4_3896	0.34	-0.4
4,325,817	-				-0.5
4,325,817	-		Pf1N1B4_3896	0.34	+0.4
4,325,817	-		Pf1N1B4_3896	0.34	-0.8
4,325,817	-		Pf1N1B4_3896	0.34	-0.5
4,325,858	+		Pf1N1B4_3896	0.36	+0.7
4,325,858	+		Pf1N1B4_3896	0.36	+1.0
4,325,858	+		Pf1N1B4_3896	0.36	-2.0
4,325,858	+		Pf1N1B4_3896	0.36	+0.0
4,325,858	+		Pf1N1B4_3896	0.36	-1.0
4,325,858	+		Pf1N1B4_3896	0.36	+0.1
4,325,858	+		Pf1N1B4_3896	0.36	-1.1
4,325,858	+		Pf1N1B4_3896	0.36	-0.2
4,325,859	-		Pf1N1B4_3896	0.36	+2.0
4,325,859	-		Pf1N1B4_3896	0.36	-1.2
4,325,859	-		Pf1N1B4_3896	0.36	-2.9
4,326,068	+		Pf1N1B4_3896	0.48	-3.4
4,326,069	-		Pf1N1B4_3896	0.48	-0.2
4,326,097	+		Pf1N1B4_3896	0.50	+0.6
4,326,097	+		Pf1N1B4_3896	0.50	-0.3
4,326,098	-		Pf1N1B4_3896	0.50	+1.4