Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3887

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,315,233	+		Pf1N1B4_3886	0.58	+0.4
4,315,233	+		Pf1N1B4_3886	0.58	+1.1
4,315,233	+		Pf1N1B4_3886	0.58	+1.1
4,315,233	+		Pf1N1B4_3886	0.58	+1.1
4,315,233	+		Pf1N1B4_3886	0.58	+0.4
4,315,233	+		Pf1N1B4_3886	0.58	+0.3
4,315,233	+		Pf1N1B4_3886	0.58	+1.8
4,315,233	+		Pf1N1B4_3886	0.58	+1.2
4,315,234	-		Pf1N1B4_3886	0.58	+0.5
4,315,234	-		Pf1N1B4_3886	0.58	-0.4
4,315,234	-		Pf1N1B4_3886	0.58	+3.3
4,315,234	-		Pf1N1B4_3886	0.58	+0.4
4,315,497	+				+0.8
4,315,498	-		Pf1N1B4_3886	0.75	+2.8
4,315,498	-		Pf1N1B4_3886	0.75	+0.3
4,315,498	-		Pf1N1B4_3886	0.75	-0.4
4,315,594	-		Pf1N1B4_3886	0.81	+0.4
4,315,594	-		Pf1N1B4_3886	0.81	-0.5
4,315,609	-		Pf1N1B4_3886	0.82	+0.1
4,315,791	+				-0.7
4,315,791	+				+0.3
4,315,791	+				-0.2
4,315,792	-				-0.2
4,315,938	-				+0.2
4,315,938	-				+1.8
4,316,009	+				-0.6
4,316,183	-		Pf1N1B4_3887	0.24	+1.3
4,316,243	+		Pf1N1B4_3887	0.32	+1.4
4,316,243	+		Pf1N1B4_3887	0.32	+0.7
4,316,498	+		Pf1N1B4_3887	0.64	+0.3
4,316,499	-		Pf1N1B4_3887	0.64	-0.4
4,316,527	-		Pf1N1B4_3887	0.68	+2.4
4,316,625	-				-0.7
4,316,717	+				+0.8
4,316,717	+				+1.7
4,316,759	+				+1.1
4,316,759	+				+1.8
4,316,760	-				-0.6
4,316,760	-				+0.3
4,316,955	-				-1.3
4,316,955	-				-1.8
4,316,956	+				+3.2
4,316,956	+				+1.2
4,316,956	+				+0.4
4,316,957	-				-2.5
4,316,957	-				-0.1
4,316,957	-				-1.2
4,316,957	-				-2.0
4,316,957	-				-3.7
4,316,957	-				-2.0
4,316,957	-				-0.2
4,316,957	-				-0.2
4,316,957	-				-0.2
4,316,957	-				-1.1
4,316,964	+				+1.3
4,316,964	+				-0.7
4,316,964	+				-0.2
4,316,964	+				+2.4
4,316,964	+				-0.2
4,316,964	+				-1.7
4,316,964	+				-0.7
4,316,964	+				+0.8
4,316,965	-				-0.7
4,316,965	-				-0.8
4,316,965	-				-0.2
4,316,965	-				-3.3
4,316,965	-				-3.3
4,316,965	-				-1.9
4,316,965	-				-1.2
4,316,965	-				-1.7
4,316,965	-				-0.5
4,316,965	-				-1.5
4,316,965	-				-0.8
4,316,965	-				-2.3
4,316,965	-				-1.6
4,316,965	-				-0.6
4,316,965	-				-1.8
4,316,965	-				-3.2
4,316,967	-				-2.0
4,316,967	-				-1.2
4,316,974	-				-2.1
4,317,046	+				+1.8
4,317,046	+				+0.4
4,317,046	+				+1.6
4,317,046	+				+0.8
4,317,046	+				+1.6
4,317,047	-				-0.5
4,317,047	-				-2.6
4,317,047	-				-0.7
4,317,047	-				-0.0
4,317,047	-				-0.7
4,317,047	-				+2.0
4,317,047	-				-0.2
4,317,047	-				+1.4
4,317,073	+				+1.8
4,317,073	+				-1.2
4,317,074	-				-1.2
4,317,074	-				+0.4
4,317,074	-				-1.6
4,317,270	+				+1.2
4,317,270	+				-0.2
4,317,270	+				-0.7
4,317,270	+				+0.3
4,317,271	-				+0.8
4,317,388	+		Pf1N1B4_3888	0.13	-0.6
4,317,389	-		Pf1N1B4_3888	0.14	-0.4
4,317,451	+		Pf1N1B4_3888	0.16	-0.5
4,317,451	+		Pf1N1B4_3888	0.16	+1.5
4,317,452	-		Pf1N1B4_3888	0.16	-0.8
4,317,479	+		Pf1N1B4_3888	0.17	+0.7
4,317,479	+		Pf1N1B4_3888	0.17	+0.6
4,317,479	+				-0.2
4,317,479	+		Pf1N1B4_3888	0.17	-1.5
4,317,481	+		Pf1N1B4_3888	0.17	-1.0
4,317,482	-				+0.8
4,317,482	-				+2.8
4,317,482	-		Pf1N1B4_3888	0.17	-1.5
4,317,482	-		Pf1N1B4_3888	0.17	+0.6
4,317,482	-		Pf1N1B4_3888	0.17	-0.8
4,317,482	-		Pf1N1B4_3888	0.17	-2.1
4,317,482	-		Pf1N1B4_3888	0.17	+2.1