Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3846

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,265,650	+		Pf1N1B4_3845	0.65	+1.3
4,265,692	+		Pf1N1B4_3845	0.67	-0.1
4,265,693	-				+1.9
4,265,693	-		Pf1N1B4_3845	0.67	+0.3
4,265,693	-		Pf1N1B4_3845	0.67	-0.5
4,265,707	-		Pf1N1B4_3845	0.68	-0.8
4,265,719	+		Pf1N1B4_3845	0.68	-1.5
4,265,719	+		Pf1N1B4_3845	0.68	+0.6
4,265,720	-				+0.4
4,265,851	+		Pf1N1B4_3845	0.74	-0.5
4,265,945	-		Pf1N1B4_3845	0.78	+0.1
4,265,945	-		Pf1N1B4_3845	0.78	-0.6
4,265,945	-		Pf1N1B4_3845	0.78	-0.7
4,266,038	-		Pf1N1B4_3845	0.81	+0.4
4,266,428	+				-1.5
4,266,428	+				-1.1
4,266,428	+				-0.9
4,266,428	+				-0.1
4,266,430	+				+0.9
4,266,430	+				-0.1
4,266,430	+				-1.1
4,266,431	-				+0.7
4,266,431	-				-2.3
4,266,478	+				-0.1
4,266,478	+				+1.1
4,266,772	+				-2.5
4,266,773	-				-3.4
4,266,773	-				-1.6
4,266,773	-				-1.9
4,266,812	+		Pf1N1B4_3846	0.12	-2.1
4,266,812	+				-0.7
4,267,162	+		Pf1N1B4_3846	0.39	-1.1
4,267,162	+		Pf1N1B4_3846	0.39	-0.7
4,267,163	-		Pf1N1B4_3846	0.39	-1.4
4,267,163	-		Pf1N1B4_3846	0.39	-3.0
4,267,163	-		Pf1N1B4_3846	0.39	-1.9
4,267,167	+		Pf1N1B4_3846	0.40	+0.9
4,267,167	+		Pf1N1B4_3846	0.40	-1.1
4,267,167	+		Pf1N1B4_3846	0.40	+0.3
4,267,167	+		Pf1N1B4_3846	0.40	+1.4
4,267,168	-		Pf1N1B4_3846	0.40	-0.1
4,267,168	-		Pf1N1B4_3846	0.40	-1.9
4,267,168	-		Pf1N1B4_3846	0.40	-1.5
4,267,168	-		Pf1N1B4_3846	0.40	-1.9
4,267,210	-		Pf1N1B4_3846	0.43	-1.9
4,267,317	+				-1.7
4,267,317	+		Pf1N1B4_3846	0.51	+0.3
4,267,318	-		Pf1N1B4_3846	0.51	-1.7
4,267,318	-		Pf1N1B4_3846	0.51	-1.1
4,267,318	-		Pf1N1B4_3846	0.51	-3.8
4,267,318	-				-0.1
4,267,344	+		Pf1N1B4_3846	0.53	-2.8
4,267,344	+		Pf1N1B4_3846	0.53	-1.0
4,267,345	-		Pf1N1B4_3846	0.53	-1.1
4,267,345	-		Pf1N1B4_3846	0.53	-2.6
4,267,345	-		Pf1N1B4_3846	0.53	-2.9
4,267,425	+		Pf1N1B4_3846	0.59	-2.6
4,267,426	-		Pf1N1B4_3846	0.59	-1.5
4,267,770	+		Pf1N1B4_3846	0.86	-3.2
4,267,770	+		Pf1N1B4_3846	0.86	-1.5
4,267,770	+		Pf1N1B4_3846	0.86	-2.5
4,267,771	-		Pf1N1B4_3846	0.86	-0.6
4,267,771	-				+1.9
4,267,771	-		Pf1N1B4_3846	0.86	-1.1
4,267,771	-		Pf1N1B4_3846	0.86	+0.9
4,267,815	+		Pf1N1B4_3846	0.89	-2.4
4,267,815	+		Pf1N1B4_3846	0.89	-2.5
4,267,815	+		Pf1N1B4_3846	0.89	+0.3
4,267,816	-				-0.7
4,267,816	-		Pf1N1B4_3846	0.89	-0.4
4,267,866	+				-1.0
4,267,866	+				-0.4
4,267,867	-				-0.7
4,267,919	-				-1.1
4,268,159	+				-1.9
4,268,207	+				-0.7
4,268,260	+				-0.5
4,268,324	+				-1.3
4,268,325	-				+0.3
4,268,512	+		Pf1N1B4_3847	0.49	-0.1
4,268,512	+		Pf1N1B4_3847	0.49	-0.1
4,268,804	-				-2.0
4,268,860	+				+0.0
4,268,941	+				+0.3
4,268,942	-				-1.1
4,268,948	-				+0.3