Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3730

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
4,138,735	+		Pf1N1B4_3728	0.77	+2.7
4,138,735	+		Pf1N1B4_3728	0.77	+0.9
4,138,739	-		Pf1N1B4_3728	0.78	+0.5
4,138,747	+		Pf1N1B4_3728	0.78	-0.1
4,138,828	+		Pf1N1B4_3728	0.82	-0.3
4,139,129	+				-0.2
4,139,155	+				-0.4
4,139,225	+				-1.4
4,139,225	+				+0.0
4,139,226	-				-0.1
4,139,285	-				+0.2
4,139,423	-				+1.9
4,139,423	-		Pf1N1B4_3729	0.44	+0.5
4,139,533	+		Pf1N1B4_3729	0.79	-0.1
4,139,533	+		Pf1N1B4_3729	0.79	+0.9
4,139,533	+		Pf1N1B4_3729	0.79	-1.2
4,139,534	-		Pf1N1B4_3729	0.80	+0.9
4,139,534	-		Pf1N1B4_3729	0.80	+0.3
4,139,534	-				+0.9
4,139,678	+				+1.5
4,139,679	-				-0.1
4,139,679	-				-2.3
4,139,679	-				+1.1
4,139,679	-				+0.7
4,139,679	-				-0.7
4,139,711	+				-0.7
4,139,711	+				-2.2
4,139,712	-				-0.7
4,139,719	+				+0.4
4,139,719	+				+1.1
4,139,768	+				-0.1
4,139,779	+				+0.9
4,139,779	+				+2.2
4,139,779	+				-2.1
4,139,780	-				+0.9
4,139,962	+		Pf1N1B4_3730	0.25	-0.1
4,139,962	+		Pf1N1B4_3730	0.25	+0.3
4,139,962	+		Pf1N1B4_3730	0.25	+0.9
4,139,974	+		Pf1N1B4_3730	0.27	+0.9
4,139,975	-		Pf1N1B4_3730	0.27	+1.4
4,140,462	+		Pf1N1B4_3730	0.77	-2.1
4,140,463	-		Pf1N1B4_3730	0.77	+0.6
4,140,562	-				-0.1
4,140,698	+				+0.2
4,140,698	+				+0.5
4,140,698	+				+0.7
4,140,699	-				+0.1
4,140,699	-				+0.3
4,140,699	-				+0.1
4,140,699	-				+0.3
4,140,699	-				+0.6
4,140,699	-				+0.3
4,140,700	+				+0.3
4,140,700	+				+0.2
4,140,700	+				+0.9
4,140,700	+				-2.2
4,140,700	+				+1.2
4,140,701	-				-1.1
4,140,701	-				-1.4
4,140,701	-				-1.7
4,140,701	-				+0.5
4,140,701	-				-1.7
4,140,701	-				+1.9
4,140,701	-				+0.2
4,140,701	-				+0.9
4,140,701	-				-0.3
4,140,701	-				+0.6
4,140,701	-				+0.5
4,140,701	-				+0.3
4,140,701	-				+0.4
4,140,701	-				-1.1
4,140,701	-				+0.9
4,140,701	-				+2.5
4,140,701	-				-0.1
4,140,702	+				+2.3
4,140,702	+				+0.9
4,140,702	+				+0.9
4,140,702	+				+1.3
4,140,702	+				-1.2
4,140,702	+				+2.5
4,140,702	+				-2.5
4,140,702	+				+0.5
4,140,702	+				+0.3
4,140,702	+				+2.5
4,140,702	+				-1.9
4,140,702	+				+1.8
4,140,703	-				+0.1
4,140,703	-				-0.1
4,140,703	-				+2.1
4,140,774	+				+0.6
4,140,780	+				-0.5
4,140,780	+				-1.1
4,140,780	+				+1.1
4,140,781	-				+0.7
4,140,862	-				-0.9
4,140,862	-				-0.7
4,140,944	-				-1.1
4,141,482	+		Pf1N1B4_3731	0.68	+0.2
4,141,483	-		Pf1N1B4_3731	0.68	-2.2
4,141,656	+				-0.1
4,141,657	-				+0.9