Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3492

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
3,898,850	+				-2.1
3,898,850	+				+0.4
3,898,974	+				-0.4
3,898,974	+		Pf1N1B4_3491	0.16	+1.2
3,898,974	+		Pf1N1B4_3491	0.16	-1.9
3,898,975	-		Pf1N1B4_3491	0.16	-0.1
3,898,975	-		Pf1N1B4_3491	0.16	-0.6
3,898,975	-				+1.5
3,898,975	-		Pf1N1B4_3491	0.16	-0.4
3,899,091	+		Pf1N1B4_3491	0.31	+0.3
3,899,091	+		Pf1N1B4_3491	0.31	+0.5
3,899,139	+		Pf1N1B4_3491	0.36	+1.2
3,899,139	+		Pf1N1B4_3491	0.36	-1.4
3,899,140	-		Pf1N1B4_3491	0.36	+0.3
3,899,159	+		Pf1N1B4_3491	0.39	+0.9
3,899,217	+		Pf1N1B4_3491	0.46	-0.3
3,899,654	-				-0.5
3,899,654	-				+1.0
3,899,654	-				+0.9
3,899,769	+				-1.7
3,899,770	-				+0.6
3,899,777	+				+1.9
3,899,777	+				+0.4
3,899,777	+				-0.6
3,899,777	+				-1.1
3,899,777	+				+1.5
3,899,777	+				+0.4
3,899,777	+				-0.1
3,899,777	+				-1.1
3,899,778	-				-0.1
3,899,778	-				-0.7
3,899,778	-				-0.7
3,899,778	-				-1.1
3,899,778	-				+0.4
3,899,778	-				-1.1
3,899,778	-				-0.5
3,899,778	-				-1.9
3,899,778	-				+0.2
3,899,805	-				+0.1
3,899,805	-				+0.2
3,899,805	-				+0.9
3,899,823	-				-2.2
3,900,215	+				+2.5
3,900,215	+		Pf1N1B4_3492	0.62	-1.1
3,900,215	+		Pf1N1B4_3492	0.62	+0.9
3,900,216	-		Pf1N1B4_3492	0.62	+0.7
3,900,216	-		Pf1N1B4_3492	0.62	-0.4
3,900,216	-		Pf1N1B4_3492	0.62	-0.7
3,900,302	+		Pf1N1B4_3492	0.75	-0.2
3,900,302	+		Pf1N1B4_3492	0.75	-0.5
3,900,303	-		Pf1N1B4_3492	0.75	-0.7
3,900,355	+		Pf1N1B4_3492	0.83	-0.1
3,900,356	-		Pf1N1B4_3492	0.83	-0.4
3,900,512	-				-0.9
3,900,512	-				+0.3
3,900,581	+				-1.5
3,900,649	+		Pf1N1B4_3493	0.15	-1.5
3,900,649	+		Pf1N1B4_3493	0.15	+0.7
3,900,650	-		Pf1N1B4_3493	0.15	-1.1
3,900,650	-		Pf1N1B4_3493	0.15	-0.8
3,900,650	-		Pf1N1B4_3493	0.15	+0.6
3,900,650	-		Pf1N1B4_3493	0.15	-1.5
3,900,650	-		Pf1N1B4_3493	0.15	-0.7
3,900,650	-		Pf1N1B4_3493	0.15	+1.2
3,900,650	-		Pf1N1B4_3493	0.15	+1.5
3,900,650	-				-0.1
3,900,650	-		Pf1N1B4_3493	0.15	-0.1
3,900,650	-		Pf1N1B4_3493	0.15	+0.9
3,900,650	-		Pf1N1B4_3493	0.15	+1.5
3,900,752	-		Pf1N1B4_3493	0.39	+0.1
3,900,893	-		Pf1N1B4_3493	0.72	-0.5
3,900,893	-		Pf1N1B4_3493	0.72	-1.4
3,900,893	-		Pf1N1B4_3493	0.72	-0.3
3,900,895	+				-0.7
3,900,895	+		Pf1N1B4_3493	0.73	-0.0
3,900,895	+		Pf1N1B4_3493	0.73	+0.9
3,900,895	+		Pf1N1B4_3493	0.73	-1.4
3,900,896	-		Pf1N1B4_3493	0.73	+0.2
3,900,896	-		Pf1N1B4_3493	0.73	-1.3
3,900,896	-		Pf1N1B4_3493	0.73	-0.1
3,900,896	-		Pf1N1B4_3493	0.73	-1.7
3,901,130	+		Pf1N1B4_3494	0.20	-1.0
3,901,176	-		Pf1N1B4_3494	0.27	-0.0
3,901,340	+		Pf1N1B4_3494	0.55	+0.2
3,901,341	-		Pf1N1B4_3494	0.55	+0.4