Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3440

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
3,834,680	+		Pf1N1B4_3438	0.88	-1.2
3,834,680	+		Pf1N1B4_3438	0.88	+0.0
3,834,792	+				+0.5
3,834,794	+				-0.1
3,834,794	+				-0.1
3,834,794	+				+0.6
3,834,794	+				+0.2
3,834,794	+				+0.6
3,834,794	+				+0.9
3,834,794	+				-1.5
3,834,794	+				-1.4
3,834,794	+				-0.9
3,834,794	+				+0.9
3,834,794	+				-0.1
3,834,794	+				-0.2
3,834,794	+				+0.9
3,834,794	+				-0.1
3,834,794	+				-0.1
3,834,794	+				-2.7
3,834,794	+				-0.1
3,834,794	+				+0.3
3,834,795	-				+1.5
3,834,795	-				-1.4
3,834,795	-				+0.0
3,834,795	-				+2.5
3,834,795	-				+2.5
3,834,930	+				+1.2
3,834,930	+				+0.3
3,834,930	+				-0.9
3,834,932	+				-0.4
3,834,932	+				+0.3
3,834,948	+				-2.1
3,834,948	+				+0.9
3,834,948	+				+0.3
3,834,948	+				+1.2
3,834,948	+				-0.2
3,835,000	+				+0.3
3,835,000	+				-2.1
3,835,226	+				+0.6
3,835,226	+				+1.4
3,835,226	+				-0.7
3,835,318	+				-0.2
3,835,318	+				+1.9
3,835,350	+				+0.9
3,835,350	+				-0.1
3,835,350	+				-0.2
3,835,350	+				+0.0
3,835,350	+				-1.0
3,835,354	+				-0.1
3,835,354	+				+0.3
3,835,354	+				-0.5
3,835,354	+				-1.0
3,835,354	+				-1.4
3,835,354	+				+0.4
3,835,354	+				+0.5
3,835,354	+				+0.8
3,835,354	+				-0.5
3,835,354	+				-0.1
3,835,354	+				+0.9
3,835,354	+				+0.5
3,835,354	+				+1.9
3,835,354	+				-2.1
3,835,354	+				-1.4
3,835,354	+				-1.7
3,835,354	+				+0.5
3,835,354	+				-0.1
3,835,354	+				-0.4
3,835,354	+				-2.5
3,835,354	+				+1.2
3,835,354	+				+2.2
3,835,354	+				+0.4
3,835,355	-				-0.4
3,835,355	-				+0.2
3,835,355	-				+1.1
3,835,355	-				-0.1
3,835,358	+				+0.3
3,835,385	+				+0.6
3,835,385	+				+0.2
3,835,385	+				-0.9
3,835,385	+				-1.1
3,835,385	+				+0.6
3,835,445	+				+0.3
3,835,445	+				+0.5
3,835,445	+				-0.1
3,835,445	+				+0.2
3,835,490	+				+0.4
3,835,491	-				-1.4
3,835,492	+				+1.1
3,835,492	+				-0.5
3,835,492	+				+0.4
3,835,492	+				-0.1
3,835,492	+				-0.3
3,835,492	+				-2.4
3,835,537	+		Pf1N1B4_3439	0.40	+0.2
3,835,537	+		Pf1N1B4_3439	0.40	+0.2
3,835,866	+		Pf1N1B4_3440	0.22	-1.9
3,835,866	+		Pf1N1B4_3440	0.22	-0.7
3,835,987	+		Pf1N1B4_3440	0.32	-1.1
3,836,110	+		Pf1N1B4_3440	0.42	-0.3
3,836,110	+		Pf1N1B4_3440	0.42	-2.4
3,836,110	+		Pf1N1B4_3440	0.42	-0.3
3,836,110	+		Pf1N1B4_3440	0.42	+0.9
3,836,110	+		Pf1N1B4_3440	0.42	-0.3
3,836,110	+		Pf1N1B4_3440	0.42	+0.3
3,836,110	+		Pf1N1B4_3440	0.42	-1.3
3,836,110	+		Pf1N1B4_3440	0.42	-1.0
3,836,110	+				+3.2
3,836,110	+		Pf1N1B4_3440	0.42	-0.3
3,836,215	+		Pf1N1B4_3440	0.51	-1.4
3,836,215	+		Pf1N1B4_3440	0.51	+0.3
3,836,215	+		Pf1N1B4_3440	0.51	-2.1
3,836,215	+		Pf1N1B4_3440	0.51	+0.9
3,836,215	+		Pf1N1B4_3440	0.51	+0.9
3,836,215	+		Pf1N1B4_3440	0.51	-0.5
3,836,215	+		Pf1N1B4_3440	0.51	-0.7
3,836,215	+		Pf1N1B4_3440	0.51	+0.2
3,836,323	+		Pf1N1B4_3440	0.60	-0.6
3,836,446	+		Pf1N1B4_3440	0.70	+0.6
3,836,446	+		Pf1N1B4_3440	0.70	-0.5
3,836,446	+		Pf1N1B4_3440	0.70	-0.5
3,836,446	+		Pf1N1B4_3440	0.70	-1.5
3,836,446	+		Pf1N1B4_3440	0.70	-0.7
3,836,446	+		Pf1N1B4_3440	0.70	+0.7
3,836,446	+				+0.5
3,836,446	+		Pf1N1B4_3440	0.70	+0.1
3,836,446	+				-0.7
3,836,578	+		Pf1N1B4_3440	0.81	-2.1
3,836,578	+		Pf1N1B4_3440	0.81	-0.3
3,836,578	+		Pf1N1B4_3440	0.81	-1.4
3,836,578	+		Pf1N1B4_3440	0.81	-0.0
3,836,578	+		Pf1N1B4_3440	0.81	-0.9
3,836,578	+		Pf1N1B4_3440	0.81	-0.4
3,836,578	+		Pf1N1B4_3440	0.81	-1.4
3,836,578	+		Pf1N1B4_3440	0.81	-0.8
3,836,578	+		Pf1N1B4_3440	0.81	-1.1
3,836,815	+				-2.6
3,836,815	+				-0.5
3,836,815	+				+0.3
3,837,010	+				-0.7
3,837,010	+				+0.1
3,837,082	+				+0.6