Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2549

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
2,892,075	+		Pf1N1B4_2548	0.14	-0.0
2,892,312	+		Pf1N1B4_2548	0.37	+1.9
2,892,312	+		Pf1N1B4_2548	0.37	+0.5
2,892,312	+		Pf1N1B4_2548	0.37	+0.1
2,892,313	-		Pf1N1B4_2548	0.37	-0.4
2,892,313	-		Pf1N1B4_2548	0.37	+1.8
2,892,313	-		Pf1N1B4_2548	0.37	+0.9
2,892,313	-		Pf1N1B4_2548	0.37	+0.1
2,892,313	-		Pf1N1B4_2548	0.37	+0.8
2,892,316	+		Pf1N1B4_2548	0.37	-0.0
2,892,316	+		Pf1N1B4_2548	0.37	+0.3
2,892,316	+		Pf1N1B4_2548	0.37	+0.7
2,892,316	+		Pf1N1B4_2548	0.37	+1.5
2,892,316	+		Pf1N1B4_2548	0.37	-0.2
2,892,317	-		Pf1N1B4_2548	0.38	-1.0
2,892,317	-		Pf1N1B4_2548	0.38	-1.6
2,892,317	-		Pf1N1B4_2548	0.38	+0.1
2,892,317	-		Pf1N1B4_2548	0.38	-1.3
2,892,396	+		Pf1N1B4_2548	0.45	-1.5
2,892,397	-		Pf1N1B4_2548	0.45	-0.6
2,892,816	+		Pf1N1B4_2548	0.85	-0.4
2,892,816	+		Pf1N1B4_2548	0.85	-0.0
2,892,817	-		Pf1N1B4_2548	0.85	-2.3
2,892,835	+		Pf1N1B4_2548	0.87	+1.0
2,892,835	+		Pf1N1B4_2548	0.87	-0.3
2,892,836	-		Pf1N1B4_2548	0.87	+1.1
2,892,939	+				-1.6
2,892,948	-				-0.1
2,892,988	+				+0.1
2,892,995	+				-0.2
2,892,996	-				-0.0
2,893,269	+		Pf1N1B4_2549	0.36	-0.7
2,893,269	+		Pf1N1B4_2549	0.36	+0.7
2,893,269	+		Pf1N1B4_2549	0.36	+0.3
2,893,269	+		Pf1N1B4_2549	0.36	+1.6
2,893,270	-		Pf1N1B4_2549	0.36	+1.0
2,893,270	-		Pf1N1B4_2549	0.36	-0.4
2,893,270	-		Pf1N1B4_2549	0.36	+0.5
2,893,290	+		Pf1N1B4_2549	0.38	-0.4
2,893,291	-		Pf1N1B4_2549	0.38	-0.4
2,893,291	-		Pf1N1B4_2549	0.38	-0.2
2,893,338	+		Pf1N1B4_2549	0.44	+1.5
2,893,450	+		Pf1N1B4_2549	0.57	+0.0
2,893,451	-		Pf1N1B4_2549	0.58	-1.4
2,893,451	-		Pf1N1B4_2549	0.58	+1.4
2,893,451	-		Pf1N1B4_2549	0.58	+2.1
2,893,630	+		Pf1N1B4_2549	0.79	+0.9
2,893,630	+		Pf1N1B4_2549	0.79	+0.8
2,893,630	+		Pf1N1B4_2549	0.79	-0.4
2,893,630	+		Pf1N1B4_2549	0.79	+1.3
2,893,630	+		Pf1N1B4_2549	0.79	+0.4
2,893,630	+		Pf1N1B4_2549	0.79	+1.8
2,893,630	+		Pf1N1B4_2549	0.79	+0.9
2,893,630	+		Pf1N1B4_2549	0.79	+1.0
2,893,631	-		Pf1N1B4_2549	0.79	+1.0
2,893,634	+		Pf1N1B4_2549	0.79	+1.6
2,893,635	-		Pf1N1B4_2549	0.80	-0.2
2,893,692	+		Pf1N1B4_2549	0.86	+0.6
2,893,692	+		Pf1N1B4_2549	0.86	+0.1
2,893,692	+		Pf1N1B4_2549	0.86	+1.7
2,893,692	+		Pf1N1B4_2549	0.86	+1.8
2,893,692	+		Pf1N1B4_2549	0.86	+1.0
2,893,692	+		Pf1N1B4_2549	0.86	+1.4
2,893,692	+		Pf1N1B4_2549	0.86	+2.2
2,893,692	+		Pf1N1B4_2549	0.86	-0.0
2,893,693	-		Pf1N1B4_2549	0.86	+0.4
2,893,693	-		Pf1N1B4_2549	0.86	-1.9
2,893,693	-		Pf1N1B4_2549	0.86	-0.3
2,893,693	-		Pf1N1B4_2549	0.86	+1.0
2,893,793	+				-0.4
2,893,793	+				-1.3
2,893,793	+				+0.8
2,893,793	+				+0.6
2,893,794	-				-1.7
2,893,851	+				-0.7
2,893,851	+				-2.0
2,893,852	-				-1.7
2,893,915	+				-1.7
2,893,915	+				+0.9
2,893,916	-				-0.9
2,893,941	+				+0.6
2,893,942	-				+0.6
2,893,953	+				-0.4
2,893,953	+				+0.7
2,893,953	+				+1.1
2,893,954	-				+1.9
2,893,954	-				+0.5
2,893,954	-				-0.4
2,894,157	-		Pf1N1B4_2550	0.29	-2.6
2,894,224	+		Pf1N1B4_2550	0.38	-1.7
2,894,224	+		Pf1N1B4_2550	0.38	+1.3
2,894,225	-		Pf1N1B4_2550	0.39	+1.0
2,894,225	-		Pf1N1B4_2550	0.39	-0.4
2,894,303	+		Pf1N1B4_2550	0.50	-1.9
2,894,518	-		Pf1N1B4_2550	0.80	-0.7
2,894,653	+				-0.1
2,894,653	+				+2.7
2,894,653	+				+0.1
2,894,653	+				+0.1
2,894,654	-				+1.3
2,894,654	-				+0.3