Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2436

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
2,758,937	+				-0.4
2,758,937	+				+0.8
2,758,937	+				-1.7
2,758,938	-				-1.4
2,758,938	-				-0.1
2,758,945	+				-0.6
2,758,945	+				-1.0
2,758,945	+				-0.4
2,759,076	+		Pf1N1B4_2434	0.52	-0.4
2,759,077	-		Pf1N1B4_2434	0.53	-1.6
2,759,180	+				-0.6
2,759,180	+				+2.4
2,759,180	+				+0.2
2,759,181	-				+1.0
2,759,181	-				+0.7
2,759,181	-				-2.0
2,759,181	-				-1.1
2,759,181	-				+1.2
2,759,247	+				-2.0
2,759,248	-				-0.4
2,759,248	-				+0.3
2,759,248	-				+0.2
2,759,248	-				+0.6
2,759,281	+		Pf1N1B4_2435	0.25	+0.2
2,759,317	+		Pf1N1B4_2435	0.48	-0.1
2,759,317	+		Pf1N1B4_2435	0.48	+1.9
2,759,329	+		Pf1N1B4_2435	0.56	+1.1
2,759,352	+		Pf1N1B4_2435	0.71	-0.8
2,759,353	-		Pf1N1B4_2435	0.72	-0.1
2,759,384	+				-0.0
2,759,384	+				+0.5
2,759,384	+				+1.0
2,759,384	+				-1.8
2,759,384	+				+0.7
2,759,384	+				+0.4
2,759,385	-				+1.7
2,759,503	+				+0.3
2,759,590	+				+2.6
2,759,622	+				-0.4
2,759,659	+				+1.2
2,759,660	-				-0.8
2,759,670	-				+0.1
2,759,911	-		Pf1N1B4_2436	0.52	+0.9
2,759,943	+		Pf1N1B4_2436	0.60	+2.0
2,759,944	-		Pf1N1B4_2436	0.60	+2.0
2,759,944	-		Pf1N1B4_2436	0.60	+2.1
2,759,983	-		Pf1N1B4_2436	0.70	+0.2
2,759,983	-		Pf1N1B4_2436	0.70	+1.3
2,759,983	-		Pf1N1B4_2436	0.70	+2.2
2,760,059	+		Pf1N1B4_2436	0.89	+2.0
2,760,059	+		Pf1N1B4_2436	0.89	+2.4
2,760,059	+		Pf1N1B4_2436	0.89	+2.0
2,760,059	+		Pf1N1B4_2436	0.89	+0.5
2,760,059	+		Pf1N1B4_2436	0.89	+1.5
2,760,059	+		Pf1N1B4_2436	0.89	+1.6
2,760,059	+		Pf1N1B4_2436	0.89	+0.5
2,760,060	-		Pf1N1B4_2436	0.89	+1.4
2,760,060	-		Pf1N1B4_2436	0.89	+0.2
2,760,060	-		Pf1N1B4_2436	0.89	+1.0
2,760,139	+				+1.7
2,760,186	+				+3.8
2,760,186	+				+2.5
2,760,187	-				-0.0
2,760,286	+				-2.0
2,760,286	+				+0.5
2,760,286	+				+0.6
2,760,286	+				+1.9
2,760,287	-				+0.2
2,760,335	+				-0.3
2,760,335	+				+0.2
2,760,400	-				-0.1
2,760,658	+		Pf1N1B4_2437	0.32	+1.2
2,760,706	+		Pf1N1B4_2437	0.37	+0.6
2,760,706	+		Pf1N1B4_2437	0.37	+0.6
2,760,706	+		Pf1N1B4_2437	0.37	-0.7
2,760,706	+		Pf1N1B4_2437	0.37	-0.4
2,760,707	-		Pf1N1B4_2437	0.37	-0.8
2,760,707	-		Pf1N1B4_2437	0.37	-0.8
2,760,707	-		Pf1N1B4_2437	0.37	-2.1
2,760,707	-		Pf1N1B4_2437	0.37	+0.4
2,760,740	-		Pf1N1B4_2437	0.40	+1.2
2,760,881	-		Pf1N1B4_2437	0.54	-0.2
2,760,881	-		Pf1N1B4_2437	0.54	-0.2
2,760,881	-		Pf1N1B4_2437	0.54	+0.2
2,761,048	+		Pf1N1B4_2437	0.71	+2.5
2,761,048	+		Pf1N1B4_2437	0.71	-0.2
2,761,048	+		Pf1N1B4_2437	0.71	-1.0