Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2023

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
2,307,649	-		Pf1N1B4_2022	0.18	-1.3
2,307,649	-		Pf1N1B4_2022	0.18	-0.1
2,307,649	-		Pf1N1B4_2022	0.18	+2.3
2,307,755	+		Pf1N1B4_2022	0.28	-1.1
2,307,755	+		Pf1N1B4_2022	0.28	+1.0
2,307,755	+		Pf1N1B4_2022	0.28	+1.0
2,307,756	-		Pf1N1B4_2022	0.28	-0.2
2,307,756	-		Pf1N1B4_2022	0.28	-0.1
2,307,756	-		Pf1N1B4_2022	0.28	+0.0
2,307,756	-		Pf1N1B4_2022	0.28	-0.2
2,308,158	-				-0.7
2,308,196	+		Pf1N1B4_2022	0.72	+0.5
2,308,196	+		Pf1N1B4_2022	0.72	-0.1
2,308,196	+		Pf1N1B4_2022	0.72	-0.4
2,308,196	+		Pf1N1B4_2022	0.72	+0.7
2,308,197	-		Pf1N1B4_2022	0.72	+0.0
2,308,197	-		Pf1N1B4_2022	0.72	-3.3
2,308,197	-		Pf1N1B4_2022	0.72	+0.3
2,308,214	+		Pf1N1B4_2022	0.74	+2.3
2,308,215	-		Pf1N1B4_2022	0.74	+0.2
2,308,215	-		Pf1N1B4_2022	0.74	-0.3
2,308,237	-		Pf1N1B4_2022	0.76	-0.5
2,308,286	+				+1.8
2,308,286	+		Pf1N1B4_2022	0.81	+1.5
2,308,287	-		Pf1N1B4_2022	0.81	-0.7
2,308,488	+				+0.4
2,308,488	+				+0.4
2,308,488	+				-0.5
2,308,489	-				+0.4
2,308,489	-				-1.4
2,308,492	+				+0.1
2,308,511	+				-0.2
2,308,511	+				-0.5
2,308,511	+				+1.3
2,308,511	+				+1.5
2,308,511	+				-0.0
2,308,512	-				-0.3
2,308,512	-				+1.4
2,308,512	-				-0.2
2,308,512	-				-1.7
2,308,512	-				-0.7
2,308,512	-				+1.8
2,308,512	-				+0.7
2,308,512	-				+0.8
2,308,513	+				-1.1
2,308,513	+				+0.5
2,308,513	+				+1.5
2,308,584	+				-1.1
2,308,585	-				+0.7
2,308,585	-				+2.0
2,308,718	-				+2.4
2,308,805	+		Pf1N1B4_2023	0.16	-0.1
2,308,805	+		Pf1N1B4_2023	0.16	+0.3
2,308,931	+		Pf1N1B4_2023	0.28	+2.5
2,308,931	+		Pf1N1B4_2023	0.28	+1.3
2,309,037	+		Pf1N1B4_2023	0.39	+2.0
2,309,038	-		Pf1N1B4_2023	0.39	+1.6
2,309,048	+		Pf1N1B4_2023	0.40	+0.6
2,309,048	+		Pf1N1B4_2023	0.40	+1.5
2,309,048	+		Pf1N1B4_2023	0.40	+1.4
2,309,049	-		Pf1N1B4_2023	0.40	+2.3
2,309,049	-		Pf1N1B4_2023	0.40	+1.8
2,309,049	-		Pf1N1B4_2023	0.40	+2.7
2,309,049	-		Pf1N1B4_2023	0.40	+1.4
2,309,177	+		Pf1N1B4_2023	0.53	+1.0
2,309,177	+		Pf1N1B4_2023	0.53	-0.3
2,309,177	+		Pf1N1B4_2023	0.53	+1.5
2,309,178	-		Pf1N1B4_2023	0.53	+0.2
2,309,178	-		Pf1N1B4_2023	0.53	-1.9
2,309,178	-		Pf1N1B4_2023	0.53	+1.3
2,309,178	-		Pf1N1B4_2023	0.53	+0.8
2,309,178	-		Pf1N1B4_2023	0.53	+1.4
2,309,178	-		Pf1N1B4_2023	0.53	+0.9
2,309,339	+		Pf1N1B4_2023	0.69	+0.7
2,309,340	-		Pf1N1B4_2023	0.69	+0.4
2,309,522	+		Pf1N1B4_2023	0.87	+0.5
2,309,522	+		Pf1N1B4_2023	0.87	-1.0
2,309,522	+		Pf1N1B4_2023	0.87	+0.3
2,309,523	-		Pf1N1B4_2023	0.87	+1.4
2,309,523	-		Pf1N1B4_2023	0.87	+0.6
2,309,604	-				+1.3
2,309,604	-				+0.3
2,309,604	-				+0.6
2,309,604	-				+0.5
2,309,604	-				+0.4
2,309,604	-				+1.1
2,309,753	+				-1.7
2,309,754	-				+1.3
2,310,126	-		Pf1N1B4_2024	0.21	+1.5
2,310,198	+		Pf1N1B4_2024	0.26	+0.5
2,310,198	+		Pf1N1B4_2024	0.26	+1.0
2,310,198	+		Pf1N1B4_2024	0.26	-0.3
2,310,199	-				+2.8
2,310,199	-		Pf1N1B4_2024	0.26	-0.3
2,310,199	-		Pf1N1B4_2024	0.26	+1.6
2,310,201	+		Pf1N1B4_2024	0.26	+2.1
2,310,201	+		Pf1N1B4_2024	0.26	+2.7
2,310,201	+		Pf1N1B4_2024	0.26	-1.6
2,310,201	+		Pf1N1B4_2024	0.26	+1.1
2,310,201	+		Pf1N1B4_2024	0.26	+0.0
2,310,201	+		Pf1N1B4_2024	0.26	+0.9
2,310,202	-		Pf1N1B4_2024	0.26	-0.3
2,310,202	-		Pf1N1B4_2024	0.26	+1.3
2,310,202	-		Pf1N1B4_2024	0.26	-0.2
2,310,202	-		Pf1N1B4_2024	0.26	+1.1
2,310,202	-		Pf1N1B4_2024	0.26	+0.3
2,310,202	-		Pf1N1B4_2024	0.26	+0.5
2,310,202	-		Pf1N1B4_2024	0.26	+1.5
2,310,202	-		Pf1N1B4_2024	0.26	+0.6
2,310,202	-		Pf1N1B4_2024	0.26	+0.7
2,310,207	+		Pf1N1B4_2024	0.26	+0.5
2,310,207	+		Pf1N1B4_2024	0.26	+1.8
2,310,208	-		Pf1N1B4_2024	0.26	+2.1
2,310,333	+		Pf1N1B4_2024	0.35	-0.9
2,310,333	+		Pf1N1B4_2024	0.35	+1.6
2,310,624	+		Pf1N1B4_2024	0.55	-1.4
2,310,624	+		Pf1N1B4_2024	0.55	-1.9
2,310,624	+		Pf1N1B4_2024	0.55	+0.7
2,310,624	+		Pf1N1B4_2024	0.55	+0.4
2,310,624	+		Pf1N1B4_2024	0.55	+0.1
2,310,625	-		Pf1N1B4_2024	0.55	+0.5
2,310,625	-		Pf1N1B4_2024	0.55	-1.6
2,310,625	-		Pf1N1B4_2024	0.55	+0.7
2,310,625	-		Pf1N1B4_2024	0.55	-0.3
2,310,625	-		Pf1N1B4_2024	0.55	-0.6
2,310,625	-		Pf1N1B4_2024	0.55	+0.5
2,310,625	-		Pf1N1B4_2024	0.55	+1.0
2,310,642	+		Pf1N1B4_2024	0.56	+1.0
2,310,642	+		Pf1N1B4_2024	0.56	-0.3
2,310,642	+		Pf1N1B4_2024	0.56	+3.3
2,310,642	+		Pf1N1B4_2024	0.56	-0.7
2,310,642	+		Pf1N1B4_2024	0.56	+1.6
2,310,642	+		Pf1N1B4_2024	0.56	+0.7
2,310,643	-		Pf1N1B4_2024	0.56	+1.3
2,310,643	-		Pf1N1B4_2024	0.56	+0.0
2,310,643	-		Pf1N1B4_2024	0.56	+0.5
2,310,643	-		Pf1N1B4_2024	0.56	+0.3