Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1629

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
1,872,089	+		Pf1N1B4_1628	0.59	+1.0
1,872,090	-		Pf1N1B4_1628	0.59	+0.2
1,872,090	-		Pf1N1B4_1628	0.59	+0.0
1,872,090	-		Pf1N1B4_1628	0.59	+0.0
1,872,103	+		Pf1N1B4_1628	0.60	-0.4
1,872,103	+		Pf1N1B4_1628	0.60	-0.1
1,872,278	+		Pf1N1B4_1628	0.70	-1.6
1,872,278	+		Pf1N1B4_1628	0.70	-1.6
1,872,278	+		Pf1N1B4_1628	0.70	-0.6
1,872,279	-		Pf1N1B4_1628	0.70	+1.2
1,872,279	-		Pf1N1B4_1628	0.70	+0.8
1,872,279	-		Pf1N1B4_1628	0.70	-0.8
1,872,279	-		Pf1N1B4_1628	0.70	-1.1
1,872,279	-				+0.2
1,872,345	+		Pf1N1B4_1628	0.74	-1.0
1,872,348	-		Pf1N1B4_1628	0.75	-0.0
1,872,348	-		Pf1N1B4_1628	0.75	-1.0
1,872,348	-		Pf1N1B4_1628	0.75	+0.9
1,872,348	-		Pf1N1B4_1628	0.75	-0.4
1,872,348	-		Pf1N1B4_1628	0.75	+0.3
1,872,348	-		Pf1N1B4_1628	0.75	+0.0
1,872,471	+		Pf1N1B4_1628	0.82	-2.1
1,872,485	+		Pf1N1B4_1628	0.83	-0.8
1,872,485	+		Pf1N1B4_1628	0.83	+0.2
1,872,486	+		Pf1N1B4_1628	0.83	-2.0
1,872,486	-		Pf1N1B4_1628	0.83	+1.6
1,872,486	-		Pf1N1B4_1628	0.83	-0.0
1,872,486	-		Pf1N1B4_1628	0.83	+0.6
1,872,486	-		Pf1N1B4_1628	0.83	+2.2
1,872,486	-		Pf1N1B4_1628	0.83	+1.8
1,872,486	-		Pf1N1B4_1628	0.83	+2.4
1,872,486	-		Pf1N1B4_1628	0.83	+0.8
1,872,486	-		Pf1N1B4_1628	0.83	-0.4
1,872,486	-		Pf1N1B4_1628	0.83	-0.8
1,872,627	-				+0.2
1,872,765	+				-1.0
1,872,765	+				+0.2
1,872,765	+				-0.4
1,872,787	+				-0.4
1,872,788	-				-1.2
1,872,788	-				+0.0
1,872,788	-				-0.1
1,872,788	-				-0.9
1,872,788	-				+0.2
1,872,788	-				-0.7
1,872,788	-				+1.0
1,872,788	-				-1.2
1,872,788	-				-1.3
1,872,788	-				-0.4
1,872,788	-				+0.9
1,872,788	-				-0.4
1,872,788	-				-1.2
1,872,788	-				+0.7
1,872,788	-				+0.3
1,872,788	-				+0.8
1,872,788	-				+0.5
1,872,788	-				-1.0
1,872,788	-				+0.2
1,872,788	-				+1.5
1,872,788	-				-1.6
1,872,788	-				-0.2
1,872,788	-				-0.1
1,872,790	+				-0.2
1,872,790	+				+0.6
1,872,790	+				-1.4
1,872,791	-				-1.4
1,872,791	-				-0.0
1,872,791	-				-0.6
1,872,791	-				-1.4
1,872,791	-				-0.8
1,872,791	-				-0.6
1,872,791	-				+0.2
1,872,791	-				-1.8
1,872,791	-				-0.7
1,872,791	-				-0.9
1,872,791	-				+0.2
1,872,791	-				-1.0
1,872,791	-				-0.4
1,872,791	-				-0.1
1,872,791	-				-0.7
1,872,791	-				+0.4
1,872,791	-				-2.1
1,872,791	-				-0.8
1,872,791	-				+0.2
1,872,791	-				+1.2
1,872,791	-				-0.4
1,872,791	-				-0.2
1,872,791	-				-0.3
1,872,791	-				+0.0
1,872,791	-				-0.0
1,872,791	-				+0.7
1,872,794	-				-0.3
1,872,794	-				-0.4
1,872,794	-				-1.4
1,872,794	-				+0.5
1,872,794	-				+0.1
1,872,794	-				+0.3
1,872,794	-				+1.2
1,872,794	-				-1.3
1,872,794	-				-0.0
1,872,794	-				+1.3
1,872,794	-				-0.2
1,872,794	-				+0.8
1,872,794	-				-0.9
1,872,794	-				+0.4
1,872,794	-				-0.5
1,872,827	-				-0.2
1,872,852	-				+2.5
1,872,852	-				-2.4
1,872,947	+				-1.6
1,872,948	-				+0.8
1,872,961	-				-0.7
1,872,961	-				-0.4
1,872,978	-				+1.5
1,872,993	+				-0.4
1,873,067	-				+1.2
1,873,067	-				+0.6
1,873,259	+		Pf1N1B4_1629	0.57	-1.1
1,873,259	+		Pf1N1B4_1629	0.57	-1.6
1,873,259	+		Pf1N1B4_1629	0.57	-1.4
1,873,259	+		Pf1N1B4_1629	0.57	-0.8
1,873,259	+		Pf1N1B4_1629	0.57	-1.1
1,873,260	-		Pf1N1B4_1629	0.57	-2.1
1,873,260	-		Pf1N1B4_1629	0.57	-1.6
1,873,260	-		Pf1N1B4_1629	0.57	-0.4
1,873,260	-		Pf1N1B4_1629	0.57	-1.1
1,873,260	-		Pf1N1B4_1629	0.57	+0.5
1,873,260	-		Pf1N1B4_1629	0.57	+2.2
1,873,465	-				-0.7
1,873,466	+				-1.1
1,873,466	+				-0.7
1,873,466	+				-0.8
1,873,467	-				+1.6
1,873,467	-				+2.2
1,873,467	-				+1.8
1,873,467	-				-2.1
1,873,467	-				+0.7
1,873,467	-				+1.9
1,873,497	+				+0.5
1,873,497	+				-0.1
1,873,497	+				-0.9
1,873,497	+				+1.7
1,873,497	+				+1.2
1,873,497	+				+0.2
1,873,497	+				+1.4
1,873,497	+				-0.1
1,873,497	+				-1.8
1,873,498	-				+1.3
1,873,498	-				+2.8
1,873,498	-				+2.2
1,873,498	-				+2.2
1,873,498	-				+1.4
1,873,498	-				+2.1
1,873,543	+				+0.5
1,873,543	+				+1.2
1,873,544	-				+1.0
1,873,544	-				+1.5
1,873,544	-				-0.3
1,873,614	+				-0.4
1,873,614	+				+0.1
1,873,614	+				+1.2
1,873,614	+				+1.9
1,873,615	-				+1.6
1,873,615	-				-0.5
1,873,615	-				+0.8
1,873,615	-				+1.2
1,873,616	+				+0.7
1,873,617	-				+0.2
1,873,617	-				+1.8
1,874,062	-		Pf1N1B4_1630	0.25	-1.1
1,874,062	-		Pf1N1B4_1630	0.25	+1.5
1,874,245	-		Pf1N1B4_1630	0.33	+3.0
1,874,245	-		Pf1N1B4_1630	0.33	+1.0