Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1571

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
1,806,081	+		Pf1N1B4_1570	0.22	+1.1
1,806,081	+		Pf1N1B4_1570	0.22	+1.2
1,806,082	-		Pf1N1B4_1570	0.22	+0.2
1,806,082	-				-1.1
1,806,154	-		Pf1N1B4_1570	0.32	+1.8
1,806,452	+		Pf1N1B4_1570	0.75	+1.0
1,806,452	+		Pf1N1B4_1570	0.75	+0.7
1,806,453	-		Pf1N1B4_1570	0.75	+1.7
1,806,453	-		Pf1N1B4_1570	0.75	+0.9
1,806,453	-		Pf1N1B4_1570	0.75	-0.4
1,806,453	-		Pf1N1B4_1570	0.75	-0.4
1,806,453	-		Pf1N1B4_1570	0.75	+1.3
1,806,453	-		Pf1N1B4_1570	0.75	+0.7
1,806,645	-				-1.1
1,806,717	+				+0.2
1,806,775	+				-0.4
1,806,784	-				-0.8
1,806,784	-				+2.8
1,806,818	+				+0.2
1,806,828	+				+1.8
1,806,828	+				-1.1
1,806,828	+				+1.2
1,806,828	+				+0.8
1,806,828	+				+2.0
1,806,829	-				+0.5
1,806,844	+				+0.2
1,806,844	+				+1.2
1,806,845	-				-0.8
1,806,854	+				+1.3
1,806,854	+				+0.6
1,806,854	+				-0.4
1,806,854	+				-0.8
1,806,855	-				-0.1
1,806,885	+				-2.1
1,806,885	+				-1.4
1,806,885	+				+0.4
1,806,885	+				+0.7
1,806,886	-				-1.3
1,806,886	-				+0.6
1,806,886	-				+0.1
1,806,886	-				+2.4
1,807,007	-				-0.0
1,807,058	+		Pf1N1B4_1571	0.11	-0.4
1,807,059	-		Pf1N1B4_1571	0.11	+1.1
1,807,206	-		Pf1N1B4_1571	0.19	+0.6
1,807,225	+		Pf1N1B4_1571	0.20	-0.4
1,807,226	-		Pf1N1B4_1571	0.20	+0.4
1,807,226	-		Pf1N1B4_1571	0.20	+1.6
1,807,415	+		Pf1N1B4_1571	0.29	-0.6
1,807,415	+		Pf1N1B4_1571	0.29	+0.2
1,807,415	+		Pf1N1B4_1571	0.29	+0.9
1,807,415	+		Pf1N1B4_1571	0.29	+1.2
1,807,415	+		Pf1N1B4_1571	0.29	+1.4
1,807,415	+		Pf1N1B4_1571	0.29	-2.5
1,807,416	-				+3.2
1,807,416	-		Pf1N1B4_1571	0.29	+0.5
1,807,416	-		Pf1N1B4_1571	0.29	+0.2
1,807,416	-		Pf1N1B4_1571	0.29	+1.8
1,807,416	-		Pf1N1B4_1571	0.29	+0.8
1,807,416	-				-0.8
1,807,416	-		Pf1N1B4_1571	0.29	+2.1
1,807,416	-		Pf1N1B4_1571	0.29	-0.6
1,807,416	-		Pf1N1B4_1571	0.29	+1.4
1,807,416	-		Pf1N1B4_1571	0.29	+1.0
1,807,418	-		Pf1N1B4_1571	0.30	+2.2
1,807,680	+		Pf1N1B4_1571	0.43	+1.4
1,807,681	-		Pf1N1B4_1571	0.43	-0.1
1,809,270	+		Pf1N1B4_1572	0.14	+0.4
1,809,271	-		Pf1N1B4_1572	0.14	+2.5
1,809,306	+		Pf1N1B4_1572	0.15	+0.2
1,809,306	+		Pf1N1B4_1572	0.15	+1.3
1,809,307	-		Pf1N1B4_1572	0.15	-0.8