Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1296

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
1,475,890	+		Pf1N1B4_1294	0.78	+1.7
1,476,030	+				-0.4
1,476,031	-				-0.9
1,476,031	-				-1.7
1,476,129	+				+0.1
1,476,130	-				+0.7
1,476,226	+		Pf1N1B4_1295	0.36	-0.1
1,476,227	-		Pf1N1B4_1295	0.36	-0.4
1,476,227	-		Pf1N1B4_1295	0.36	-0.6
1,476,351	+				+1.1
1,476,351	+				+1.0
1,476,352	-				-0.9
1,476,352	-				-0.7
1,476,352	-				+0.9
1,476,352	-				-0.9
1,476,449	+				+0.1
1,476,462	+				+0.5
1,476,462	+				+0.3
1,476,462	+				-0.3
1,476,462	+				+0.6
1,476,462	+				+2.1
1,476,469	+				-1.9
1,476,470	-				-1.1
1,476,470	-				-1.0
1,476,481	+				+0.6
1,476,481	+				+1.1
1,476,482	-				+0.5
1,476,583	+				+0.6
1,476,584	-				-0.4
1,476,584	-				+0.6
1,476,622	+				-0.9
1,476,622	+				-2.7
1,476,623	-				-1.2
1,476,623	-				-0.3
1,476,639	+				-1.2
1,476,639	+				-0.9
1,476,640	-				-2.6
1,476,640	-				-1.1
1,476,640	-				-2.4
1,476,640	-				-2.2
1,476,640	-				-0.4
1,476,765	+				-1.4
1,476,813	+				+0.7
1,476,814	-				-0.7
1,476,837	+		Pf1N1B4_1296	0.11	-0.4
1,476,837	+		Pf1N1B4_1296	0.11	+0.1
1,476,837	+		Pf1N1B4_1296	0.11	-1.6
1,476,838	-		Pf1N1B4_1296	0.11	-1.1
1,476,838	-		Pf1N1B4_1296	0.11	+0.1
1,476,927	+		Pf1N1B4_1296	0.16	-1.0
1,476,928	-		Pf1N1B4_1296	0.16	-2.0
1,476,928	-		Pf1N1B4_1296	0.16	+0.3
1,476,954	-		Pf1N1B4_1296	0.17	-0.2
1,476,990	+		Pf1N1B4_1296	0.19	-1.8
1,476,990	+		Pf1N1B4_1296	0.19	-1.3
1,476,991	-		Pf1N1B4_1296	0.19	+1.4
1,476,991	-		Pf1N1B4_1296	0.19	-2.4
1,476,991	-		Pf1N1B4_1296	0.19	-0.1
1,477,146	+		Pf1N1B4_1296	0.27	-1.7
1,477,146	+		Pf1N1B4_1296	0.27	-1.7
1,477,146	+		Pf1N1B4_1296	0.27	-0.4
1,477,146	+		Pf1N1B4_1296	0.27	-1.6
1,477,146	+		Pf1N1B4_1296	0.27	-1.0
1,477,146	+		Pf1N1B4_1296	0.27	+0.1
1,477,146	+		Pf1N1B4_1296	0.27	-1.9
1,477,147	-		Pf1N1B4_1296	0.27	-1.4
1,477,147	-		Pf1N1B4_1296	0.27	-0.9
1,477,147	-		Pf1N1B4_1296	0.27	-1.6
1,477,147	-		Pf1N1B4_1296	0.27	-0.2
1,477,147	-		Pf1N1B4_1296	0.27	-0.4
1,477,147	-		Pf1N1B4_1296	0.27	-0.2
1,477,147	-		Pf1N1B4_1296	0.27	-0.1
1,477,147	-		Pf1N1B4_1296	0.27	-0.2
1,477,147	-		Pf1N1B4_1296	0.27	-0.9
1,477,147	-		Pf1N1B4_1296	0.27	-0.1
1,477,245	+		Pf1N1B4_1296	0.32	-0.8
1,477,245	+		Pf1N1B4_1296	0.32	-0.1
1,477,246	-		Pf1N1B4_1296	0.32	-0.8
1,477,246	-		Pf1N1B4_1296	0.32	-0.1
1,477,246	-		Pf1N1B4_1296	0.32	-1.2
1,477,246	-		Pf1N1B4_1296	0.32	-2.2
1,477,246	-		Pf1N1B4_1296	0.32	-1.4
1,477,296	+		Pf1N1B4_1296	0.35	-0.2
1,477,296	+		Pf1N1B4_1296	0.35	+1.1
1,477,320	+		Pf1N1B4_1296	0.36	-0.6
1,477,320	+				-0.2
1,477,320	+		Pf1N1B4_1296	0.36	+1.1
1,477,320	+		Pf1N1B4_1296	0.36	-2.7
1,477,321	-		Pf1N1B4_1296	0.36	-1.4
1,477,321	-		Pf1N1B4_1296	0.36	+0.1
1,477,321	-		Pf1N1B4_1296	0.36	-0.1
1,477,321	-		Pf1N1B4_1296	0.36	-0.9
1,477,321	-		Pf1N1B4_1296	0.36	-2.2
1,477,321	-				+0.1
1,477,338	+		Pf1N1B4_1296	0.37	-0.9
1,477,338	+		Pf1N1B4_1296	0.37	+0.4
1,477,338	+		Pf1N1B4_1296	0.37	-0.9
1,477,587	+		Pf1N1B4_1296	0.50	-1.2
1,477,602	+		Pf1N1B4_1296	0.51	-1.4
1,477,602	+		Pf1N1B4_1296	0.51	-2.1
1,477,603	-		Pf1N1B4_1296	0.51	-2.7
1,477,603	-		Pf1N1B4_1296	0.51	-1.2
1,477,603	-		Pf1N1B4_1296	0.51	-0.5
1,477,603	-		Pf1N1B4_1296	0.51	-0.6
1,477,641	+		Pf1N1B4_1296	0.53	-2.1
1,477,642	-		Pf1N1B4_1296	0.53	-0.0
1,477,710	+		Pf1N1B4_1296	0.57	-0.4
1,477,710	+		Pf1N1B4_1296	0.57	-0.7
1,477,743	+		Pf1N1B4_1296	0.58	-0.4
1,477,743	+		Pf1N1B4_1296	0.58	-0.9
1,478,017	+		Pf1N1B4_1296	0.73	+1.1
1,478,018	-		Pf1N1B4_1296	0.73	+0.6
1,478,018	-		Pf1N1B4_1296	0.73	-1.3
1,478,232	+		Pf1N1B4_1296	0.84	+0.4
1,478,233	-		Pf1N1B4_1296	0.84	-0.4
1,478,292	-		Pf1N1B4_1296	0.87	-2.2
1,478,550	+				-1.3
1,478,552	+				+0.0
1,478,552	+				+0.1
1,478,563	+				-0.6
1,478,563	+				+0.1
1,478,563	+				-2.0
1,478,563	+				-0.2
1,478,563	+				-2.7
1,478,564	-				+1.4
1,478,564	-				+1.1
1,478,564	-				-0.1
1,478,564	-				-2.0
1,478,596	+				-0.7
1,478,596	+				-0.2
1,478,617	-				-2.3
1,478,617	-				+0.9
1,478,635	+				-1.7
1,478,635	+				-0.7
1,478,635	+				-2.4
1,478,635	+				-1.3
1,478,636	-				+0.4
1,478,661	-				+0.2
1,478,696	+				-1.2
1,478,696	+				-0.4
1,478,696	+				-1.6
1,478,696	+				-0.2
1,478,696	+				+1.1
1,478,697	-				+0.7
1,478,697	-				+0.6
1,478,697	-				-2.0
1,478,697	-				+1.6
1,478,697	-				-2.2
1,479,300	-				+0.9
1,479,341	-				-2.2
1,479,343	+				-0.9
1,479,344	-				+1.6
1,479,344	-				-0.9
1,479,349	+				+2.4
1,479,350	-				-0.4
1,479,350	-				-1.7
1,479,350	-				-1.4
1,479,350	-				-0.7
1,479,350	-				-1.4
1,479,350	-				+1.1
1,479,426	+				-1.2
1,479,426	+				+0.4
1,479,426	+				-0.2
1,479,426	+				+0.0
1,479,427	-				-0.4
1,479,427	-				-0.4
1,479,428	+				-1.0
1,479,429	-				+1.7
1,479,429	-				+0.6
1,479,473	+				-1.0
1,479,473	+				-1.2
1,479,474	-				+0.3