Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1133

Experiment: Carbenicillin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 2 mg/ml
1,270,239	+				+1.1
1,270,239	+				-0.9
1,270,239	+				+0.0
1,270,240	-				+1.4
1,270,240	-				+0.1
1,270,240	-				+0.1
1,270,240	-				-0.5
1,270,278	+				-0.5
1,270,278	+				-1.7
1,270,278	+				+0.3
1,270,279	-				+1.1
1,270,279	-				+0.1
1,270,281	+				+0.4
1,270,281	+				+0.7
1,270,281	+				+0.9
1,270,282	-				+1.3
1,270,282	-				+1.8
1,270,282	-				-1.2
1,270,284	+				-0.6
1,270,285	-				+0.5
1,270,285	-				+0.6
1,270,285	-				+0.4
1,270,398	-		Pf1N1B4_1132	0.15	-0.1
1,270,415	+		Pf1N1B4_1132	0.17	+2.3
1,270,416	-		Pf1N1B4_1132	0.17	-0.9
1,270,523	+		Pf1N1B4_1132	0.29	+3.1
1,270,524	-		Pf1N1B4_1132	0.29	+0.8
1,270,524	-		Pf1N1B4_1132	0.29	+0.6
1,270,524	-		Pf1N1B4_1132	0.29	+0.5
1,270,634	+		Pf1N1B4_1132	0.42	-0.1
1,270,634	+		Pf1N1B4_1132	0.42	+1.9
1,270,635	-		Pf1N1B4_1132	0.42	-0.2
1,270,635	-		Pf1N1B4_1132	0.42	+0.3
1,270,635	-		Pf1N1B4_1132	0.42	+2.1
1,270,635	-		Pf1N1B4_1132	0.42	+0.8
1,270,670	+		Pf1N1B4_1132	0.46	+1.7
1,270,854	-		Pf1N1B4_1132	0.66	+2.4
1,270,854	-		Pf1N1B4_1132	0.66	+1.9
1,270,896	-				+1.7
1,270,896	-		Pf1N1B4_1132	0.71	+0.3
1,270,896	-		Pf1N1B4_1132	0.71	-1.7
1,270,955	+		Pf1N1B4_1132	0.78	+2.1
1,270,955	+		Pf1N1B4_1132	0.78	+0.1
1,270,955	+		Pf1N1B4_1132	0.78	+1.5
1,270,955	+		Pf1N1B4_1132	0.78	-1.7
1,270,955	+				-0.9
1,270,955	+		Pf1N1B4_1132	0.78	+1.1
1,270,955	+		Pf1N1B4_1132	0.78	+0.1
1,270,955	+		Pf1N1B4_1132	0.78	+1.4
1,270,955	+		Pf1N1B4_1132	0.78	+2.1
1,270,956	-		Pf1N1B4_1132	0.78	-0.5
1,270,956	-		Pf1N1B4_1132	0.78	+0.2
1,270,956	-		Pf1N1B4_1132	0.78	+1.4
1,270,956	-		Pf1N1B4_1132	0.78	+0.1
1,270,967	+		Pf1N1B4_1132	0.79	+0.1
1,270,967	+		Pf1N1B4_1132	0.79	-0.9
1,270,967	+		Pf1N1B4_1132	0.79	-1.2
1,270,998	-		Pf1N1B4_1132	0.82	+1.7
1,271,396	+		Pf1N1B4_1133	0.35	-1.1
1,271,397	-		Pf1N1B4_1133	0.35	-0.9
1,271,483	+		Pf1N1B4_1133	0.48	+0.7
1,271,483	+				-1.2
1,271,483	+		Pf1N1B4_1133	0.48	-1.9
1,271,483	+		Pf1N1B4_1133	0.48	+1.1
1,271,483	+		Pf1N1B4_1133	0.48	+0.3
1,271,484	-		Pf1N1B4_1133	0.48	+0.5
1,271,484	-		Pf1N1B4_1133	0.48	-0.1
1,271,484	-		Pf1N1B4_1133	0.48	+2.7
1,271,484	-		Pf1N1B4_1133	0.48	+0.4
1,271,484	-		Pf1N1B4_1133	0.48	+0.8
1,271,484	-		Pf1N1B4_1133	0.48	+0.1
1,271,679	+		Pf1N1B4_1133	0.78	-0.9
1,271,679	+		Pf1N1B4_1133	0.78	-0.2
1,271,680	-		Pf1N1B4_1133	0.78	+0.6
1,271,680	-		Pf1N1B4_1133	0.78	+1.1
1,271,680	-		Pf1N1B4_1133	0.78	-1.2
1,272,054	+				+1.5
1,272,054	+		Pf1N1B4_1134	0.20	-0.5
1,272,055	-		Pf1N1B4_1134	0.20	-0.1
1,272,055	-		Pf1N1B4_1134	0.20	+0.6
1,272,064	+		Pf1N1B4_1134	0.21	-1.5
1,272,065	-		Pf1N1B4_1134	0.21	-0.2
1,272,065	-		Pf1N1B4_1134	0.21	+0.2
1,272,211	+		Pf1N1B4_1134	0.34	+0.7
1,272,556	-		Pf1N1B4_1134	0.64	-0.1
1,272,667	+		Pf1N1B4_1134	0.73	+0.3
1,272,706	+		Pf1N1B4_1134	0.77	-1.9
1,272,754	+		Pf1N1B4_1134	0.81	-1.5
1,272,755	-		Pf1N1B4_1134	0.81	+0.0
1,272,755	-		Pf1N1B4_1134	0.81	+1.1
1,272,784	+		Pf1N1B4_1134	0.83	-0.1
1,272,784	+		Pf1N1B4_1134	0.83	-1.5
1,272,797	+		Pf1N1B4_1134	0.85	-0.1
1,272,797	+		Pf1N1B4_1134	0.85	-1.2
1,272,797	+		Pf1N1B4_1134	0.85	+1.6
1,272,797	+		Pf1N1B4_1134	0.85	+0.2
1,272,797	+		Pf1N1B4_1134	0.85	-0.7
1,272,797	+		Pf1N1B4_1134	0.85	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	+0.2
1,272,797	+		Pf1N1B4_1134	0.85	-0.5
1,272,797	+		Pf1N1B4_1134	0.85	+2.9
1,272,797	+		Pf1N1B4_1134	0.85	-1.2
1,272,797	+		Pf1N1B4_1134	0.85	+0.1
1,272,798	-		Pf1N1B4_1134	0.85	+0.7
1,272,798	-		Pf1N1B4_1134	0.85	-0.9
1,272,798	-		Pf1N1B4_1134	0.85	-0.1
1,272,798	-		Pf1N1B4_1134	0.85	+1.7
1,272,798	-		Pf1N1B4_1134	0.85	-0.6
1,272,798	-		Pf1N1B4_1134	0.85	-0.7
1,272,798	-		Pf1N1B4_1134	0.85	+1.7
1,272,801	+		Pf1N1B4_1134	0.85	+1.1
1,272,801	+		Pf1N1B4_1134	0.85	-0.5
1,272,801	+		Pf1N1B4_1134	0.85	+1.1
1,272,801	+		Pf1N1B4_1134	0.85	+0.9
1,272,801	+		Pf1N1B4_1134	0.85	+0.5
1,272,802	-		Pf1N1B4_1134	0.85	+0.5
1,272,820	+		Pf1N1B4_1134	0.87	+1.4
1,272,820	+		Pf1N1B4_1134	0.87	+1.7
1,272,820	+		Pf1N1B4_1134	0.87	+0.9
1,272,820	+		Pf1N1B4_1134	0.87	+0.1
1,272,821	-		Pf1N1B4_1134	0.87	+0.7
1,272,821	-		Pf1N1B4_1134	0.87	+0.8