Experiment: Carbenicillin 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07660 and ABZR86_RS07665 overlap by 4 nucleotides ABZR86_RS07665 and ABZR86_RS07670 overlap by 11 nucleotides
ABZR86_RS07660: ABZR86_RS07660 - exodeoxyribonuclease V subunit gamma, at 1,699,249 to 1,702,737
_RS07660
ABZR86_RS07665: ABZR86_RS07665 - exodeoxyribonuclease V subunit beta, at 1,702,734 to 1,706,405
_RS07665
ABZR86_RS07670: ABZR86_RS07670 - exodeoxyribonuclease V subunit alpha, at 1,706,395 to 1,708,341
_RS07670
Position (kb)
1702
1703
1704
1705
1706
1707 Strain fitness (log2 ratio)
-2
-1
0
1 at 1701.877 kb on + strand, within ABZR86_RS07660 at 1701.878 kb on - strand, within ABZR86_RS07660 at 1702.162 kb on + strand, within ABZR86_RS07660 at 1702.253 kb on - strand, within ABZR86_RS07660 at 1702.253 kb on - strand, within ABZR86_RS07660 at 1702.620 kb on + strand at 1702.624 kb on + strand at 1702.624 kb on + strand at 1702.625 kb on - strand at 1702.625 kb on - strand at 1702.625 kb on - strand at 1703.959 kb on - strand, within ABZR86_RS07665 at 1704.754 kb on + strand, within ABZR86_RS07665 at 1705.233 kb on + strand, within ABZR86_RS07665 at 1705.234 kb on - strand, within ABZR86_RS07665 at 1705.432 kb on + strand, within ABZR86_RS07665 at 1705.433 kb on - strand, within ABZR86_RS07665 at 1705.522 kb on - strand, within ABZR86_RS07665 at 1705.522 kb on - strand, within ABZR86_RS07665 at 1705.600 kb on + strand, within ABZR86_RS07665 at 1705.601 kb on - strand, within ABZR86_RS07665 at 1705.995 kb on - strand, within ABZR86_RS07665 at 1706.094 kb on + strand at 1706.095 kb on - strand at 1706.106 kb on + strand at 1706.142 kb on + strand at 1706.196 kb on + strand at 1706.205 kb on + strand at 1706.205 kb on + strand at 1706.251 kb on - strand at 1706.940 kb on + strand, within ABZR86_RS07670
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.04 mg/ml remove 1,701,877 + ABZR86_RS07660 0.75 -0.4 1,701,878 - ABZR86_RS07660 0.75 -0.6 1,702,162 + ABZR86_RS07660 0.83 +0.1 1,702,253 - ABZR86_RS07660 0.86 -0.4 1,702,253 - ABZR86_RS07660 0.86 +0.3 1,702,620 + -0.6 1,702,624 + -1.1 1,702,624 + -0.5 1,702,625 - -1.1 1,702,625 - -1.4 1,702,625 - +0.6 1,703,959 - ABZR86_RS07665 0.33 -0.7 1,704,754 + ABZR86_RS07665 0.55 -0.9 1,705,233 + ABZR86_RS07665 0.68 -0.4 1,705,234 - ABZR86_RS07665 0.68 -0.2 1,705,432 + ABZR86_RS07665 0.73 -0.7 1,705,433 - ABZR86_RS07665 0.74 +0.3 1,705,522 - ABZR86_RS07665 0.76 -1.6 1,705,522 - ABZR86_RS07665 0.76 -2.0 1,705,600 + ABZR86_RS07665 0.78 -0.9 1,705,601 - ABZR86_RS07665 0.78 -0.9 1,705,995 - ABZR86_RS07665 0.89 -1.1 1,706,094 + -1.4 1,706,095 - -0.4 1,706,106 + -0.1 1,706,142 + -2.3 1,706,196 + -1.7 1,706,205 + -1.2 1,706,205 + -1.0 1,706,251 - -0.3 1,706,940 + ABZR86_RS07670 0.28 -1.4
Or see this region's nucleotide sequence