Experiment: Chlorate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0457 and fghA are separated by 35 nucleotides fghA and Synpcc7942_0459 are separated by 5 nucleotides Synpcc7942_0459 and Synpcc7942_0460 are separated by 139 nucleotides Synpcc7942_0460 and Synpcc7942_0461 are separated by 96 nucleotides
Synpcc7942_0457: Synpcc7942_0457 - hypothetical protein, at 445,562 to 446,179
_0457
Synpcc7942_0458: fghA - Carboxylesterase, at 446,215 to 447,051
fghA
Synpcc7942_0459: Synpcc7942_0459 - glutathione-dependent formaldehyde dehydrogenase, at 447,057 to 448,166
_0459
Synpcc7942_0460: Synpcc7942_0460 - putative acetyltransferase, at 448,306 to 448,779
_0460
Synpcc7942_0461: Synpcc7942_0461 - hypothetical protein, at 448,876 to 449,313
_0461
Position (kb) 447
448
449 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 446.071 kb on + strand, within Synpcc7942_0457 at 446.120 kb on + strand at 446.169 kb on + strand at 446.169 kb on + strand at 446.185 kb on + strand at 446.200 kb on - strand at 446.234 kb on + strand at 446.242 kb on - strand at 446.287 kb on + strand at 446.318 kb on - strand, within fghA at 446.324 kb on - strand, within fghA at 446.337 kb on - strand, within fghA at 446.343 kb on + strand, within fghA at 446.453 kb on + strand, within fghA at 446.468 kb on - strand, within fghA at 446.477 kb on + strand, within fghA at 446.499 kb on - strand, within fghA at 446.507 kb on + strand, within fghA at 446.515 kb on - strand, within fghA at 446.533 kb on + strand, within fghA at 446.545 kb on + strand, within fghA at 446.553 kb on - strand, within fghA at 446.570 kb on + strand, within fghA at 446.578 kb on - strand, within fghA at 446.580 kb on + strand, within fghA at 446.588 kb on - strand, within fghA at 446.595 kb on - strand, within fghA at 446.665 kb on + strand, within fghA at 446.700 kb on + strand, within fghA at 446.708 kb on - strand, within fghA at 446.710 kb on - strand, within fghA at 446.741 kb on + strand, within fghA at 446.749 kb on - strand, within fghA at 446.782 kb on + strand, within fghA at 446.888 kb on + strand, within fghA at 446.896 kb on - strand, within fghA at 446.901 kb on - strand, within fghA at 446.901 kb on - strand, within fghA at 446.909 kb on + strand, within fghA at 446.917 kb on - strand, within fghA at 446.930 kb on - strand, within fghA at 446.930 kb on - strand, within fghA at 446.932 kb on - strand, within fghA at 446.947 kb on - strand, within fghA at 446.960 kb on - strand, within fghA at 446.965 kb on - strand, within fghA at 446.977 kb on + strand at 446.979 kb on + strand at 446.984 kb on + strand at 446.985 kb on - strand at 446.991 kb on + strand at 446.999 kb on - strand at 447.007 kb on - strand at 447.035 kb on + strand at 447.064 kb on - strand at 447.195 kb on - strand, within Synpcc7942_0459 at 447.203 kb on + strand, within Synpcc7942_0459 at 447.212 kb on - strand, within Synpcc7942_0459 at 447.219 kb on - strand, within Synpcc7942_0459 at 447.238 kb on + strand, within Synpcc7942_0459 at 447.238 kb on + strand, within Synpcc7942_0459 at 447.238 kb on + strand, within Synpcc7942_0459 at 447.238 kb on + strand, within Synpcc7942_0459 at 447.246 kb on - strand, within Synpcc7942_0459 at 447.259 kb on + strand, within Synpcc7942_0459 at 447.292 kb on + strand, within Synpcc7942_0459 at 447.327 kb on + strand, within Synpcc7942_0459 at 447.329 kb on - strand, within Synpcc7942_0459 at 447.342 kb on + strand, within Synpcc7942_0459 at 447.388 kb on - strand, within Synpcc7942_0459 at 447.413 kb on + strand, within Synpcc7942_0459 at 447.450 kb on - strand, within Synpcc7942_0459 at 447.474 kb on + strand, within Synpcc7942_0459 at 447.475 kb on + strand, within Synpcc7942_0459 at 447.560 kb on - strand, within Synpcc7942_0459 at 447.577 kb on - strand, within Synpcc7942_0459 at 447.579 kb on + strand, within Synpcc7942_0459 at 447.579 kb on + strand, within Synpcc7942_0459 at 447.579 kb on + strand, within Synpcc7942_0459 at 447.587 kb on - strand at 447.587 kb on - strand, within Synpcc7942_0459 at 447.627 kb on + strand, within Synpcc7942_0459 at 447.627 kb on + strand, within Synpcc7942_0459 at 447.627 kb on + strand, within Synpcc7942_0459 at 447.627 kb on + strand, within Synpcc7942_0459 at 447.627 kb on + strand, within Synpcc7942_0459 at 447.635 kb on - strand, within Synpcc7942_0459 at 447.676 kb on + strand, within Synpcc7942_0459 at 447.677 kb on + strand, within Synpcc7942_0459 at 447.678 kb on - strand, within Synpcc7942_0459 at 447.683 kb on - strand, within Synpcc7942_0459 at 447.684 kb on - strand, within Synpcc7942_0459 at 447.689 kb on - strand, within Synpcc7942_0459 at 447.732 kb on + strand, within Synpcc7942_0459 at 447.733 kb on + strand, within Synpcc7942_0459 at 447.747 kb on + strand, within Synpcc7942_0459 at 447.765 kb on + strand, within Synpcc7942_0459 at 447.773 kb on - strand, within Synpcc7942_0459 at 447.788 kb on + strand, within Synpcc7942_0459 at 447.796 kb on - strand, within Synpcc7942_0459 at 447.813 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.825 kb on + strand, within Synpcc7942_0459 at 447.833 kb on - strand, within Synpcc7942_0459 at 447.833 kb on - strand, within Synpcc7942_0459 at 447.833 kb on - strand, within Synpcc7942_0459 at 447.833 kb on - strand, within Synpcc7942_0459 at 447.833 kb on - strand, within Synpcc7942_0459 at 447.833 kb on - strand, within Synpcc7942_0459 at 447.854 kb on + strand, within Synpcc7942_0459 at 447.861 kb on - strand, within Synpcc7942_0459 at 447.868 kb on + strand, within Synpcc7942_0459 at 447.893 kb on + strand, within Synpcc7942_0459 at 447.911 kb on + strand, within Synpcc7942_0459 at 447.939 kb on + strand, within Synpcc7942_0459 at 447.939 kb on + strand, within Synpcc7942_0459 at 447.940 kb on + strand, within Synpcc7942_0459 at 447.963 kb on + strand, within Synpcc7942_0459 at 447.992 kb on - strand, within Synpcc7942_0459 at 448.028 kb on + strand, within Synpcc7942_0459 at 448.036 kb on - strand, within Synpcc7942_0459 at 448.036 kb on - strand, within Synpcc7942_0459 at 448.042 kb on + strand, within Synpcc7942_0459 at 448.050 kb on - strand, within Synpcc7942_0459 at 448.094 kb on - strand at 448.094 kb on - strand at 448.138 kb on + strand at 448.146 kb on - strand at 448.177 kb on - strand at 448.196 kb on + strand at 448.245 kb on + strand at 448.251 kb on + strand at 448.251 kb on + strand at 448.275 kb on - strand at 448.275 kb on - strand at 448.296 kb on - strand at 448.309 kb on + strand at 448.329 kb on + strand at 448.329 kb on + strand at 448.329 kb on + strand at 448.341 kb on + strand at 448.341 kb on + strand at 448.346 kb on + strand at 448.346 kb on + strand at 448.346 kb on + strand at 448.354 kb on - strand, within Synpcc7942_0460 at 448.414 kb on + strand, within Synpcc7942_0460 at 448.418 kb on + strand, within Synpcc7942_0460 at 448.436 kb on - strand, within Synpcc7942_0460 at 448.436 kb on - strand, within Synpcc7942_0460 at 448.443 kb on - strand, within Synpcc7942_0460 at 448.449 kb on - strand, within Synpcc7942_0460 at 448.483 kb on - strand, within Synpcc7942_0460 at 448.510 kb on + strand, within Synpcc7942_0460 at 448.511 kb on + strand, within Synpcc7942_0460 at 448.529 kb on - strand, within Synpcc7942_0460 at 448.552 kb on - strand, within Synpcc7942_0460 at 448.610 kb on - strand, within Synpcc7942_0460 at 448.669 kb on + strand, within Synpcc7942_0460 at 448.701 kb on + strand, within Synpcc7942_0460 at 448.712 kb on + strand, within Synpcc7942_0460 at 448.772 kb on - strand at 448.779 kb on - strand at 448.818 kb on - strand at 448.841 kb on - strand at 448.847 kb on + strand at 448.849 kb on + strand at 448.849 kb on + strand at 448.895 kb on + strand at 448.895 kb on + strand at 448.896 kb on + strand at 448.896 kb on + strand at 448.953 kb on - strand, within Synpcc7942_0461 at 448.953 kb on - strand, within Synpcc7942_0461 at 448.953 kb on - strand, within Synpcc7942_0461 at 448.965 kb on - strand, within Synpcc7942_0461 at 449.131 kb on + strand, within Synpcc7942_0461 at 449.139 kb on - strand, within Synpcc7942_0461 at 449.139 kb on - strand, within Synpcc7942_0461 at 449.139 kb on - strand, within Synpcc7942_0461 at 449.141 kb on + strand, within Synpcc7942_0461
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorate 10 mM remove 446,071 + Synpcc7942_0457 0.82 -1.2 446,120 + +0.0 446,169 + -2.6 446,169 + -0.5 446,185 + +0.4 446,200 - -1.1 446,234 + -0.6 446,242 - -1.9 446,287 + -2.1 446,318 - fghA Synpcc7942_0458 0.12 +0.4 446,324 - fghA Synpcc7942_0458 0.13 -0.1 446,337 - fghA Synpcc7942_0458 0.15 -1.0 446,343 + fghA Synpcc7942_0458 0.15 +0.4 446,453 + fghA Synpcc7942_0458 0.28 -0.3 446,468 - fghA Synpcc7942_0458 0.30 -0.6 446,477 + fghA Synpcc7942_0458 0.31 -1.6 446,499 - fghA Synpcc7942_0458 0.34 -1.6 446,507 + fghA Synpcc7942_0458 0.35 -1.1 446,515 - fghA Synpcc7942_0458 0.36 +1.0 446,533 + fghA Synpcc7942_0458 0.38 -0.4 446,545 + fghA Synpcc7942_0458 0.39 -1.0 446,553 - fghA Synpcc7942_0458 0.40 +0.8 446,570 + fghA Synpcc7942_0458 0.42 -1.6 446,578 - fghA Synpcc7942_0458 0.43 -0.2 446,580 + fghA Synpcc7942_0458 0.44 -1.0 446,588 - fghA Synpcc7942_0458 0.45 +0.0 446,595 - fghA Synpcc7942_0458 0.45 +0.0 446,665 + fghA Synpcc7942_0458 0.54 -2.9 446,700 + fghA Synpcc7942_0458 0.58 -1.6 446,708 - fghA Synpcc7942_0458 0.59 -0.0 446,710 - fghA Synpcc7942_0458 0.59 -1.8 446,741 + fghA Synpcc7942_0458 0.63 -0.8 446,749 - fghA Synpcc7942_0458 0.64 -0.8 446,782 + fghA Synpcc7942_0458 0.68 +0.3 446,888 + fghA Synpcc7942_0458 0.80 -0.1 446,896 - fghA Synpcc7942_0458 0.81 -0.2 446,901 - fghA Synpcc7942_0458 0.82 -0.7 446,901 - fghA Synpcc7942_0458 0.82 -0.7 446,909 + fghA Synpcc7942_0458 0.83 -1.0 446,917 - fghA Synpcc7942_0458 0.84 -0.4 446,930 - fghA Synpcc7942_0458 0.85 +0.4 446,930 - fghA Synpcc7942_0458 0.85 -1.1 446,932 - fghA Synpcc7942_0458 0.86 -2.6 446,947 - fghA Synpcc7942_0458 0.87 -1.6 446,960 - fghA Synpcc7942_0458 0.89 +0.2 446,965 - fghA Synpcc7942_0458 0.90 -0.7 446,977 + +1.4 446,979 + -2.6 446,984 + +0.8 446,985 - -1.3 446,991 + +1.6 446,999 - -1.6 447,007 - -1.6 447,035 + -1.6 447,064 - -0.6 447,195 - Synpcc7942_0459 0.12 -2.9 447,203 + Synpcc7942_0459 0.13 +0.3 447,212 - Synpcc7942_0459 0.14 -0.8 447,219 - Synpcc7942_0459 0.15 +1.0 447,238 + Synpcc7942_0459 0.16 -2.6 447,238 + Synpcc7942_0459 0.16 -0.8 447,238 + Synpcc7942_0459 0.16 -1.6 447,238 + Synpcc7942_0459 0.16 +1.0 447,246 - Synpcc7942_0459 0.17 -2.0 447,259 + Synpcc7942_0459 0.18 -0.6 447,292 + Synpcc7942_0459 0.21 -4.4 447,327 + Synpcc7942_0459 0.24 -2.6 447,329 - Synpcc7942_0459 0.25 -1.6 447,342 + Synpcc7942_0459 0.26 -3.1 447,388 - Synpcc7942_0459 0.30 -2.1 447,413 + Synpcc7942_0459 0.32 -1.6 447,450 - Synpcc7942_0459 0.35 -1.6 447,474 + Synpcc7942_0459 0.38 -1.3 447,475 + Synpcc7942_0459 0.38 -2.6 447,560 - Synpcc7942_0459 0.45 -1.6 447,577 - Synpcc7942_0459 0.47 +1.3 447,579 + Synpcc7942_0459 0.47 -2.6 447,579 + Synpcc7942_0459 0.47 -0.8 447,579 + Synpcc7942_0459 0.47 -1.6 447,587 - -0.6 447,587 - Synpcc7942_0459 0.48 -0.8 447,627 + Synpcc7942_0459 0.51 -2.1 447,627 + Synpcc7942_0459 0.51 -1.3 447,627 + Synpcc7942_0459 0.51 -2.2 447,627 + Synpcc7942_0459 0.51 -2.6 447,627 + Synpcc7942_0459 0.51 -3.6 447,635 - Synpcc7942_0459 0.52 -2.1 447,676 + Synpcc7942_0459 0.56 -0.8 447,677 + Synpcc7942_0459 0.56 -1.8 447,678 - Synpcc7942_0459 0.56 -1.6 447,683 - Synpcc7942_0459 0.56 +1.8 447,684 - Synpcc7942_0459 0.56 -1.6 447,689 - Synpcc7942_0459 0.57 -1.6 447,732 + Synpcc7942_0459 0.61 -1.8 447,733 + Synpcc7942_0459 0.61 -0.8 447,747 + Synpcc7942_0459 0.62 -2.8 447,765 + Synpcc7942_0459 0.64 -0.9 447,773 - Synpcc7942_0459 0.65 -1.6 447,788 + Synpcc7942_0459 0.66 -2.9 447,796 - Synpcc7942_0459 0.67 -2.6 447,813 + Synpcc7942_0459 0.68 -2.6 447,825 + Synpcc7942_0459 0.69 -0.4 447,825 + Synpcc7942_0459 0.69 -0.1 447,825 + Synpcc7942_0459 0.69 -0.2 447,825 + Synpcc7942_0459 0.69 -1.6 447,825 + Synpcc7942_0459 0.69 -0.6 447,825 + Synpcc7942_0459 0.69 -3.6 447,825 + Synpcc7942_0459 0.69 -0.6 447,833 - Synpcc7942_0459 0.70 -1.9 447,833 - Synpcc7942_0459 0.70 +1.0 447,833 - Synpcc7942_0459 0.70 -1.6 447,833 - Synpcc7942_0459 0.70 +0.8 447,833 - Synpcc7942_0459 0.70 -2.9 447,833 - Synpcc7942_0459 0.70 -2.0 447,854 + Synpcc7942_0459 0.72 +0.4 447,861 - Synpcc7942_0459 0.72 +0.0 447,868 + Synpcc7942_0459 0.73 -0.6 447,893 + Synpcc7942_0459 0.75 -1.3 447,911 + Synpcc7942_0459 0.77 -1.6 447,939 + Synpcc7942_0459 0.79 -1.6 447,939 + Synpcc7942_0459 0.79 -0.6 447,940 + Synpcc7942_0459 0.80 +0.0 447,963 + Synpcc7942_0459 0.82 -3.1 447,992 - Synpcc7942_0459 0.84 +0.0 448,028 + Synpcc7942_0459 0.87 -1.6 448,036 - Synpcc7942_0459 0.88 -0.6 448,036 - Synpcc7942_0459 0.88 -2.6 448,042 + Synpcc7942_0459 0.89 -0.0 448,050 - Synpcc7942_0459 0.89 -1.1 448,094 - -2.6 448,094 - +1.2 448,138 + +0.4 448,146 - -0.6 448,177 - -3.1 448,196 + -1.6 448,245 + -3.1 448,251 + +1.2 448,251 + -1.6 448,275 - -0.1 448,275 - -0.2 448,296 - -0.7 448,309 + +0.2 448,329 + -1.6 448,329 + -0.3 448,329 + -0.2 448,341 + +0.0 448,341 + -1.1 448,346 + -0.2 448,346 + +1.4 448,346 + -0.1 448,354 - Synpcc7942_0460 0.10 +0.2 448,414 + Synpcc7942_0460 0.23 -0.1 448,418 + Synpcc7942_0460 0.24 -0.6 448,436 - Synpcc7942_0460 0.27 +1.5 448,436 - Synpcc7942_0460 0.27 +0.2 448,443 - Synpcc7942_0460 0.29 +3.9 448,449 - Synpcc7942_0460 0.30 +0.6 448,483 - Synpcc7942_0460 0.37 +0.2 448,510 + Synpcc7942_0460 0.43 +0.8 448,511 + Synpcc7942_0460 0.43 +1.0 448,529 - Synpcc7942_0460 0.47 +0.5 448,552 - Synpcc7942_0460 0.52 +1.1 448,610 - Synpcc7942_0460 0.64 -0.2 448,669 + Synpcc7942_0460 0.77 -2.6 448,701 + Synpcc7942_0460 0.83 +0.3 448,712 + Synpcc7942_0460 0.86 -1.0 448,772 - +1.1 448,779 - +1.0 448,818 - +0.0 448,841 - +0.1 448,847 + +1.0 448,849 + +0.5 448,849 + +1.0 448,895 + +0.7 448,895 + +1.2 448,896 + -2.3 448,896 + -0.4 448,953 - Synpcc7942_0461 0.18 +0.7 448,953 - Synpcc7942_0461 0.18 +0.0 448,953 - Synpcc7942_0461 0.18 +0.5 448,965 - Synpcc7942_0461 0.20 +1.3 449,131 + Synpcc7942_0461 0.58 +0.7 449,139 - Synpcc7942_0461 0.60 +0.2 449,139 - Synpcc7942_0461 0.60 -0.6 449,139 - Synpcc7942_0461 0.60 +1.3 449,141 + Synpcc7942_0461 0.61 +2.4
Or see this region's nucleotide sequence