Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_766 and Pf1N1B4_767 are separated by 76 nucleotides Pf1N1B4_767 and Pf1N1B4_768 are separated by 83 nucleotides
Pf1N1B4_766 - Glycerol uptake facilitator protein, at 870,101 to 870,910
_766
Pf1N1B4_767 - Glycerol kinase (EC 2.7.1.30), at 870,987 to 872,492
_767
Pf1N1B4_768 - Glycerol-3-phosphate regulon repressor, DeoR family, at 872,576 to 873,331
_768
Position (kb) 870
871
872
873 Strain fitness (log2 ratio) -2
-1
0
1
2 at 870.073 kb on - strand at 870.332 kb on + strand, within Pf1N1B4_766 at 870.332 kb on + strand at 870.333 kb on - strand at 871.004 kb on + strand at 871.290 kb on + strand, within Pf1N1B4_767 at 871.291 kb on - strand at 871.291 kb on - strand, within Pf1N1B4_767 at 871.291 kb on - strand, within Pf1N1B4_767 at 871.365 kb on + strand, within Pf1N1B4_767 at 871.365 kb on + strand, within Pf1N1B4_767 at 871.531 kb on + strand at 871.532 kb on - strand, within Pf1N1B4_767 at 871.545 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.774 kb on - strand, within Pf1N1B4_767 at 871.774 kb on - strand at 871.971 kb on + strand, within Pf1N1B4_767 at 871.971 kb on + strand, within Pf1N1B4_767 at 871.972 kb on - strand, within Pf1N1B4_767 at 872.007 kb on + strand, within Pf1N1B4_767 at 872.313 kb on + strand, within Pf1N1B4_767 at 872.313 kb on + strand, within Pf1N1B4_767 at 872.491 kb on - strand at 872.508 kb on + strand at 872.508 kb on + strand at 872.508 kb on + strand at 872.509 kb on - strand at 872.509 kb on - strand at 872.509 kb on - strand at 872.509 kb on - strand at 873.329 kb on + strand at 873.398 kb on + strand at 873.398 kb on + strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.401 kb on - strand at 873.401 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 870,073 - +1.6 870,332 + Pf1N1B4_766 0.29 +0.2 870,332 + +1.2 870,333 - -0.4 871,004 + +1.2 871,290 + Pf1N1B4_767 0.20 -0.1 871,291 - +0.2 871,291 - Pf1N1B4_767 0.20 +0.6 871,291 - Pf1N1B4_767 0.20 +0.2 871,365 + Pf1N1B4_767 0.25 -1.0 871,365 + Pf1N1B4_767 0.25 -1.4 871,531 + -1.1 871,532 - Pf1N1B4_767 0.36 +1.0 871,545 + Pf1N1B4_767 0.37 -1.6 871,773 + Pf1N1B4_767 0.52 +2.2 871,773 + Pf1N1B4_767 0.52 -0.6 871,773 + Pf1N1B4_767 0.52 -0.4 871,773 + Pf1N1B4_767 0.52 +1.2 871,774 - Pf1N1B4_767 0.52 -0.4 871,774 - +1.3 871,971 + Pf1N1B4_767 0.65 -0.8 871,971 + Pf1N1B4_767 0.65 -2.6 871,972 - Pf1N1B4_767 0.65 -1.1 872,007 + Pf1N1B4_767 0.68 +0.8 872,313 + Pf1N1B4_767 0.88 -1.1 872,313 + Pf1N1B4_767 0.88 +0.2 872,491 - -0.0 872,508 + -1.3 872,508 + +0.8 872,508 + -0.1 872,509 - -0.4 872,509 - -0.0 872,509 - +1.5 872,509 - -1.1 873,329 + -2.5 873,398 + -1.4 873,398 + +0.5 873,399 - -1.6 873,399 - +0.7 873,399 - +0.1 873,399 - +0.4 873,399 - -1.1 873,399 - +1.2 873,399 - -0.1 873,399 - -0.8 873,401 - +0.0 873,401 - -0.8 873,474 - -0.4 873,474 - +1.2 873,474 - +0.2 873,474 - -1.1 873,474 - +0.0 873,474 - +0.5
Or see this region's nucleotide sequence