Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02801

Experiment: PYE with nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrate 100 mM
2,957,327	-				-0.4
2,957,352	+				+0.1
2,957,360	-				+2.3
2,957,370	+				-0.2
2,957,389	+				+1.0
2,957,413	+				-1.4
2,957,421	-				-1.1
2,957,437	+				+1.0
2,957,463	+				-2.2
2,957,471	+		CCNA_02800	0.11	-1.4
2,957,471	+		CCNA_02800	0.11	+1.2
2,957,471	-		CCNA_02800	0.11	+0.3
2,957,479	-		CCNA_02800	0.13	+2.4
2,957,513	+		CCNA_02800	0.20	-1.7
2,957,525	-		CCNA_02800	0.23	-1.2
2,957,525	-		CCNA_02800	0.23	+0.3
2,957,532	-		CCNA_02800	0.24	-0.2
2,957,574	-		CCNA_02800	0.33	-2.2
2,957,575	+		CCNA_02800	0.33	-0.2
2,957,599	+		CCNA_02800	0.38	+0.6
2,957,605	+		CCNA_02800	0.39	+0.4
2,957,635	+		CCNA_02800	0.46	+1.0
2,957,643	-		CCNA_02800	0.47	+3.0
2,957,643	-		CCNA_02800	0.47	-0.4
2,957,645	+		CCNA_02800	0.48	+0.7
2,957,653	-		CCNA_02800	0.49	+0.6
2,957,653	-		CCNA_02800	0.49	-0.2
2,957,688	+		CCNA_02800	0.57	+2.4
2,957,694	-		CCNA_02800	0.58	+1.4
2,957,698	+		CCNA_02800	0.59	+1.8
2,957,755	+		CCNA_02800	0.71	+0.8
2,957,763	-		CCNA_02800	0.72	-1.9
2,957,763	-		CCNA_02800	0.72	-0.9
2,957,768	-		CCNA_02800	0.73	-0.4
2,957,781	-		CCNA_02800	0.76	+0.4
2,957,786	-		CCNA_02800	0.77	+1.1
2,957,807	+		CCNA_02800	0.81	-1.6
2,957,807	+		CCNA_02800	0.81	-0.0
2,957,807	+		CCNA_02800	0.81	+0.3
2,957,807	+		CCNA_02800	0.81	+0.4
2,957,807	+		CCNA_02800	0.81	-0.8
2,957,809	+		CCNA_02800	0.82	+1.0
2,957,815	-		CCNA_02800	0.83	-0.5
2,957,815	-		CCNA_02800	0.83	-0.5
2,957,815	-		CCNA_02800	0.83	+0.7
2,957,823	+		CCNA_02800	0.85	-0.1
2,957,865	-				-0.4
2,957,898	-				-0.8
2,957,898	-				-0.5
2,957,906	+				-1.9
2,957,929	-				-0.4
2,957,929	-				+1.8
2,957,946	-				+0.6
2,957,962	+				-0.3
2,958,016	-				+0.8
2,958,044	+				-0.8
2,958,053	+				+1.1
2,958,053	+				+2.0
2,958,061	-				+0.2
2,958,061	-				-1.7
2,958,129	-				-0.5
2,958,129	-				-1.2
2,958,139	-				-0.7
2,958,139	-				+0.4
2,958,189	+				+2.0
2,958,189	+				+0.0
2,958,200	+				+0.3
2,958,208	-				+0.4
2,958,279	-				+0.1
2,958,309	+				-1.5
2,958,319	+				+0.4
2,958,327	-				+0.1
2,958,351	+				-0.6
2,958,359	-				-0.2
2,958,384	+				+1.4
2,958,483	+		CCNA_02801	0.16	+0.2
2,958,512	-		CCNA_02801	0.19	+0.9
2,958,533	-		CCNA_02801	0.21	-1.6
2,958,572	+		CCNA_02801	0.25	+2.0
2,958,572	+		CCNA_02801	0.25	-0.1
2,958,580	-		CCNA_02801	0.25	+1.2
2,958,580	-		CCNA_02801	0.25	+0.1
2,958,581	-		CCNA_02801	0.26	-1.6
2,958,596	-		CCNA_02801	0.27	-0.7
2,958,605	+		CCNA_02801	0.28	+0.4
2,958,605	+		CCNA_02801	0.28	-0.6
2,958,605	+		CCNA_02801	0.28	+0.1
2,958,605	+		CCNA_02801	0.28	-0.3
2,958,611	-		CCNA_02801	0.29	+0.2
2,958,613	-		CCNA_02801	0.29	+2.0
2,958,675	-		CCNA_02801	0.35	-0.7
2,958,695	-		CCNA_02801	0.37	-1.0
2,958,697	+		CCNA_02801	0.37	-0.9
2,958,705	-		CCNA_02801	0.38	-0.4
2,958,705	-		CCNA_02801	0.38	+1.0
2,958,709	+		CCNA_02801	0.38	-0.6
2,958,734	-		CCNA_02801	0.41	-2.8
2,958,767	+				+1.4
2,958,767	+				+2.4
2,958,767	+		CCNA_02801	0.44	-1.4
2,958,775	-		CCNA_02801	0.45	-0.4
2,958,775	-		CCNA_02801	0.45	-0.6
2,958,775	-		CCNA_02801	0.45	+0.7
2,958,775	-		CCNA_02801	0.45	+0.6
2,958,808	+		CCNA_02801	0.48	-0.1
2,958,826	-		CCNA_02801	0.50	-1.2
2,958,826	-		CCNA_02801	0.50	-0.4
2,958,826	-		CCNA_02801	0.50	-1.0
2,958,841	+		CCNA_02801	0.51	+0.6
2,958,841	+		CCNA_02801	0.51	+0.3
2,958,841	+		CCNA_02801	0.51	+0.8
2,958,846	+		CCNA_02801	0.52	-1.6
2,958,849	-		CCNA_02801	0.52	-2.3
2,958,849	-		CCNA_02801	0.52	+1.2
2,958,849	-		CCNA_02801	0.52	+1.7
2,958,867	+		CCNA_02801	0.54	-2.0
2,958,922	+		CCNA_02801	0.59	+0.4
2,958,946	-		CCNA_02801	0.62	-0.0
2,958,977	+		CCNA_02801	0.65	+0.3
2,958,982	+		CCNA_02801	0.65	-1.2
2,958,985	-		CCNA_02801	0.66	-1.7
2,958,985	-		CCNA_02801	0.66	+0.0
2,959,006	+		CCNA_02801	0.68	-0.7
2,959,019	-		CCNA_02801	0.69	-0.4
2,959,019	-		CCNA_02801	0.69	-1.7
2,959,021	-		CCNA_02801	0.69	+0.9
2,959,032	+		CCNA_02801	0.70	-0.9
2,959,078	+		CCNA_02801	0.75	-1.2
2,959,096	-		CCNA_02801	0.77	-0.0
2,959,102	-		CCNA_02801	0.77	-1.7
2,959,130	+		CCNA_02801	0.80	-2.0
2,959,138	+		CCNA_02801	0.81	-1.2
2,959,230	+				+1.1
2,959,238	-				-0.3
2,959,238	-				-0.8
2,959,238	-				+1.3
2,959,241	+				+2.4
2,959,248	+				+0.6
2,959,248	+				-0.2
2,959,248	+				+0.0
2,959,249	-				+1.4
2,959,260	+				+0.2
2,959,267	+				+0.9
2,959,353	-				+0.2
2,959,391	+				+0.6
2,959,399	-				-0.7
2,959,399	-				-1.4
2,959,401	+				+0.7
2,959,419	+		CCNA_02802	0.14	-1.3
2,959,457	+		CCNA_02802	0.26	-0.4
2,959,471	+		CCNA_02802	0.31	-2.1
2,959,493	+		CCNA_02802	0.38	+1.0
2,959,506	-		CCNA_02802	0.42	-0.3
2,959,513	+		CCNA_02802	0.44	+0.6
2,959,516	-		CCNA_02802	0.45	+1.3
2,959,538	+		CCNA_02802	0.52	+0.4
2,959,552	+		CCNA_02802	0.57	-0.1
2,959,552	+		CCNA_02802	0.57	+0.3
2,959,552	+		CCNA_02802	0.57	+0.8
2,959,560	-		CCNA_02802	0.59	-0.7
2,959,583	-		CCNA_02802	0.67	+0.8
2,959,590	-		CCNA_02802	0.69	+0.1
2,959,593	+		CCNA_02802	0.70	+0.2
2,959,603	-		CCNA_02802	0.73	+0.6
2,959,609	+		CCNA_02802	0.75	+0.6
2,959,609	+		CCNA_02802	0.75	+1.0
2,959,609	+		CCNA_02802	0.75	-0.8
2,959,617	-		CCNA_02802	0.78	-0.2
2,959,649	-				+2.4
2,959,651	+		CCNA_02802	0.88	+1.7
2,959,681	+				+0.4
2,959,681	+				-0.1
2,959,731	-				+1.0
2,959,743	+				+0.2
2,959,751	-				+0.3
2,959,753	-				-0.8
2,959,757	+				+1.4
2,959,765	-				-2.4
2,959,765	-				-0.9
2,959,765	-				-1.5
2,959,824	+				+0.7
2,959,875	-				+0.0
2,959,881	+				-0.2
2,959,886	+				+1.2
2,959,887	+				+1.0
2,959,888	+				+0.8
2,959,889	-				+0.4
2,959,894	-				-0.2
2,959,894	-				+1.0
2,959,918	+				+0.4
2,959,946	+				-0.6
2,959,946	+				-0.8
2,959,946	+				+0.0
2,959,946	+				+0.7
2,959,946	+				+0.2
2,959,946	+				-0.0
2,959,946	+				-2.1
2,959,946	+				-0.7
2,959,946	+				+0.2
2,959,953	+				+1.1
2,959,953	+				+0.0
2,959,954	-				-0.1
2,959,954	-				+2.7
2,959,954	-				-0.4
2,959,954	-				+2.3
2,959,954	-				-1.2
2,959,954	-				+0.2
2,959,954	-				+0.1
2,959,954	-				+1.0
2,959,954	-				-1.1
2,959,967	-				-1.7
2,960,004	+		CCNA_03977	0.16	+0.1
2,960,015	-		CCNA_03977	0.20	+0.4
2,960,055	+		CCNA_03977	0.35	-0.6
2,960,089	+		CCNA_03977	0.48	-0.1
2,960,090	-		CCNA_03977	0.49	-0.4
2,960,094	+		CCNA_03977	0.50	+0.8
2,960,096	-		CCNA_03977	0.51	+1.4
2,960,097	-		CCNA_03977	0.51	+0.6
2,960,120	+		CCNA_03977	0.60	+0.9
2,960,120	+		CCNA_03977	0.60	-1.5
2,960,130	+		CCNA_03977	0.64	+0.4
2,960,138	-		CCNA_03977	0.67	-0.5
2,960,138	-		CCNA_03977	0.67	+0.3
2,960,154	+		CCNA_03977	0.73	-0.3
2,960,154	+		CCNA_03977	0.73	+1.6
2,960,177	+		CCNA_03977	0.82	-0.7
2,960,246	+				-0.5
2,960,285	+				-0.6