Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02237

Experiment: PYE with nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrate 100 mM
2,384,986	-				+0.6
2,385,012	+				+0.8
2,385,012	+				-2.0
2,385,020	-				-0.4
2,385,020	-				-2.3
2,385,030	-				+0.6
2,385,037	-				-0.4
2,385,039	+				-1.3
2,385,042	-				+0.2
2,385,060	+				-1.3
2,385,161	-		CCNA_02236	0.18	-2.2
2,385,161	-		CCNA_02236	0.18	-1.1
2,385,195	+		CCNA_02236	0.21	-0.3
2,385,205	+		CCNA_02236	0.23	+0.0
2,385,213	-		CCNA_02236	0.23	-0.4
2,385,213	-		CCNA_02236	0.23	+0.8
2,385,273	+		CCNA_02236	0.30	+0.6
2,385,285	-		CCNA_02236	0.31	+0.2
2,385,285	-		CCNA_02236	0.31	-0.6
2,385,292	+		CCNA_02236	0.32	-0.5
2,385,292	+		CCNA_02236	0.32	-1.9
2,385,298	+		CCNA_02236	0.33	-1.8
2,385,306	-		CCNA_02236	0.34	-0.7
2,385,316	-		CCNA_02236	0.35	-2.2
2,385,350	+		CCNA_02236	0.39	+0.0
2,385,372	-		CCNA_02236	0.41	-0.6
2,385,374	-		CCNA_02236	0.41	+0.0
2,385,382	-		CCNA_02236	0.42	-2.1
2,385,411	+		CCNA_02236	0.45	+0.1
2,385,430	-		CCNA_02236	0.47	-2.2
2,385,520	-		CCNA_02236	0.57	-1.8
2,385,545	+		CCNA_02236	0.60	+1.8
2,385,548	-		CCNA_02236	0.60	-2.3
2,385,553	-		CCNA_02236	0.61	-0.4
2,385,635	-		CCNA_02236	0.70	-0.1
2,385,649	+		CCNA_02236	0.72	-2.0
2,385,709	-		CCNA_02236	0.78	+0.4
2,385,711	+		CCNA_02236	0.78	-1.1
2,385,726	+		CCNA_02236	0.80	-0.0
2,385,733	+		CCNA_02236	0.81	+0.0
2,385,753	+		CCNA_02236	0.83	-0.9
2,385,802	-				+2.0
2,385,813	+				+2.4
2,385,828	-				-0.4
2,385,842	+				-2.0
2,385,847	+				-1.6
2,385,850	-				+0.0
2,385,856	+				-1.8
2,385,895	+				+0.6
2,385,905	-				+0.8
2,386,018	+				+1.0
2,386,018	+				+0.8
2,386,018	+				-1.8
2,386,018	+				-1.3
2,386,026	-				+0.2
2,386,029	+				-0.4
2,386,050	-				-1.2
2,386,068	+				+1.3
2,386,098	+				+0.3
2,386,124	+				+0.2
2,386,132	-				-1.3
2,386,141	+				-2.5
2,386,165	-				-1.5
2,386,172	-				-1.2
2,386,181	+				+0.7
2,386,211	-		CCNA_02237	0.11	-1.8
2,386,226	+		CCNA_02237	0.11	+0.9
2,386,231	+		CCNA_02237	0.12	+1.0
2,386,231	+		CCNA_02237	0.12	-0.5
2,386,239	-		CCNA_02237	0.12	-1.7
2,386,260	-		CCNA_02237	0.13	-1.5
2,386,267	+		CCNA_02237	0.13	+0.2
2,386,288	+		CCNA_02237	0.14	-0.5
2,386,307	+		CCNA_02237	0.15	+0.2
2,386,315	-		CCNA_02237	0.15	-0.4
2,386,317	+		CCNA_02237	0.15	-0.4
2,386,335	+		CCNA_02237	0.16	+1.4
2,386,343	-		CCNA_02237	0.17	-0.2
2,386,405	+		CCNA_02237	0.19	-0.4
2,386,407	+		CCNA_02237	0.20	+0.1
2,386,413	+		CCNA_02237	0.20	+0.9
2,386,415	-		CCNA_02237	0.20	-1.4
2,386,438	+		CCNA_02237	0.21	+0.9
2,386,443	+		CCNA_02237	0.21	-1.0
2,386,446	-		CCNA_02237	0.21	-0.6
2,386,454	+		CCNA_02237	0.22	-0.9
2,386,469	-		CCNA_02237	0.22	-2.2
2,386,484	-		CCNA_02237	0.23	-1.9
2,386,489	+		CCNA_02237	0.23	+1.8
2,386,491	-		CCNA_02237	0.23	+0.3
2,386,520	+		CCNA_02237	0.25	+0.3
2,386,528	-		CCNA_02237	0.25	+0.0
2,386,528	-		CCNA_02237	0.25	-0.7
2,386,544	+		CCNA_02237	0.26	+0.7
2,386,549	+		CCNA_02237	0.26	-1.1
2,386,549	+		CCNA_02237	0.26	+0.2
2,386,557	-		CCNA_02237	0.26	-0.2
2,386,557	-		CCNA_02237	0.26	-1.0
2,386,583	+		CCNA_02237	0.27	-0.2
2,386,601	+		CCNA_02237	0.28	-0.8
2,386,616	-		CCNA_02237	0.29	-1.7
2,386,622	-		CCNA_02237	0.29	-0.4
2,386,642	-		CCNA_02237	0.30	+0.2
2,386,738	+		CCNA_02237	0.34	+0.4
2,386,738	+		CCNA_02237	0.34	+0.1
2,386,738	+		CCNA_02237	0.34	-2.2
2,386,746	-		CCNA_02237	0.35	-2.7
2,386,746	-		CCNA_02237	0.35	-1.9
2,386,746	-		CCNA_02237	0.35	-2.5
2,386,746	-		CCNA_02237	0.35	-0.4
2,386,786	+		CCNA_02237	0.37	+0.4
2,386,793	+		CCNA_02237	0.37	+2.1
2,386,819	+		CCNA_02237	0.38	+0.9
2,386,819	+		CCNA_02237	0.38	-0.5
2,386,819	+		CCNA_02237	0.38	+0.4
2,386,819	+		CCNA_02237	0.38	+0.6
2,386,819	+		CCNA_02237	0.38	-2.1
2,386,819	-		CCNA_02237	0.38	-1.2
2,386,827	-		CCNA_02237	0.38	-2.0
2,386,827	-		CCNA_02237	0.38	-0.5
2,386,827	-		CCNA_02237	0.38	-1.2
2,386,827	-		CCNA_02237	0.38	-0.2
2,386,827	-		CCNA_02237	0.38	-0.3
2,386,827	-		CCNA_02237	0.38	-1.9
2,386,827	-		CCNA_02237	0.38	-1.0
2,386,827	-		CCNA_02237	0.38	-1.7
2,386,852	+		CCNA_02237	0.40	+0.9
2,386,860	-		CCNA_02237	0.40	+1.1
2,386,860	-		CCNA_02237	0.40	-2.0
2,386,904	+		CCNA_02237	0.42	+1.5
2,386,904	+		CCNA_02237	0.42	-0.0
2,386,904	-		CCNA_02237	0.42	+0.4
2,386,912	-		CCNA_02237	0.42	-0.2
2,386,934	+		CCNA_02237	0.43	-0.1
2,387,115	+		CCNA_02237	0.51	+0.5
2,387,115	+		CCNA_02237	0.51	+0.3
2,387,208	-		CCNA_02237	0.56	-1.7
2,387,223	-		CCNA_02237	0.56	+0.3
2,387,228	+		CCNA_02237	0.57	-0.2
2,387,228	+		CCNA_02237	0.57	+1.2
2,387,236	-		CCNA_02237	0.57	-1.1
2,387,236	-		CCNA_02237	0.57	-1.5
2,387,236	-		CCNA_02237	0.57	-0.9
2,387,256	+		CCNA_02237	0.58	-1.0
2,387,272	+		CCNA_02237	0.59	-0.4
2,387,332	+		CCNA_02237	0.61	+0.6
2,387,332	+		CCNA_02237	0.61	+0.5
2,387,334	+		CCNA_02237	0.61	+0.2
2,387,344	+		CCNA_02237	0.62	-0.3
2,387,352	-		CCNA_02237	0.62	-0.3
2,387,422	-		CCNA_02237	0.65	+0.5
2,387,427	-		CCNA_02237	0.66	-0.6
2,387,431	+		CCNA_02237	0.66	+1.0
2,387,455	-		CCNA_02237	0.67	-0.3
2,387,457	+		CCNA_02237	0.67	+0.3
2,387,462	+		CCNA_02237	0.67	+0.0
2,387,465	-		CCNA_02237	0.67	-1.3
2,387,472	+		CCNA_02237	0.68	-0.3
2,387,487	-		CCNA_02237	0.68	-2.4
2,387,493	+		CCNA_02237	0.69	-2.1
2,387,539	-		CCNA_02237	0.71	-0.1
2,387,571	+		CCNA_02237	0.72	-0.3
2,387,579	-		CCNA_02237	0.72	-1.0
2,387,725	+		CCNA_02237	0.79	+0.9
2,387,735	+		CCNA_02237	0.79	+1.2
2,387,740	+		CCNA_02237	0.80	-0.0
2,387,743	-		CCNA_02237	0.80	+0.4
2,387,748	-		CCNA_02237	0.80	-1.9
2,387,781	-		CCNA_02237	0.82	+0.6
2,387,806	-		CCNA_02237	0.83	-0.2
2,387,824	+		CCNA_02237	0.83	-0.2
2,387,833	-		CCNA_02237	0.84	-0.3
2,387,861	+		CCNA_02237	0.85	+0.2
2,387,865	+		CCNA_02237	0.85	+0.5
2,387,875	+		CCNA_02237	0.86	+0.6
2,387,880	+		CCNA_02237	0.86	+0.7
2,387,884	+		CCNA_02237	0.86	+0.2
2,387,884	+		CCNA_02237	0.86	+0.9
2,387,889	+		CCNA_02237	0.86	+0.2
2,387,892	-		CCNA_02237	0.87	+0.8
2,387,897	-		CCNA_02237	0.87	-0.2
2,387,920	+		CCNA_02237	0.88	+0.7
2,387,920	+		CCNA_02237	0.88	+0.5
2,388,040	+				+1.4
2,388,053	+				+0.3
2,388,176	+				+1.7
2,388,195	+				+1.1
2,388,195	+				+0.6
2,388,203	-				-0.7
2,388,208	-				-2.2
2,388,218	-				-1.3
2,388,251	+				-1.3
2,388,259	-				-1.6
2,388,291	+				-1.7
2,388,297	+				-0.8
2,388,299	-				-0.7
2,388,299	-				+0.0
2,388,305	-				+0.1
2,388,324	+				+0.6
2,388,346	-				-0.6
2,388,369	-		CCNA_02238	0.20	+0.8
2,388,371	-		CCNA_02238	0.21	+1.9
2,388,380	-		CCNA_02238	0.25	-1.4
2,388,461	+		CCNA_02238	0.64	-1.0
2,388,469	+		CCNA_02238	0.68	-0.6
2,388,469	+		CCNA_02238	0.68	+0.9
2,388,477	-		CCNA_02238	0.72	-0.9
2,388,477	-		CCNA_02238	0.72	+0.0
2,388,504	-		CCNA_02238	0.85	+0.6
2,388,528	+				-1.3
2,388,528	+				-0.3
2,388,540	+				+0.5
2,388,631	+				-0.1
2,388,665	-		CCNA_02239	0.10	+0.1
2,388,675	-		CCNA_02239	0.11	+0.5
2,388,680	-		CCNA_02239	0.12	-0.6
2,388,713	-		CCNA_02239	0.15	-0.3
2,388,748	-		CCNA_02239	0.18	+0.7
2,388,816	+		CCNA_02239	0.23	-2.6
2,388,924	+		CCNA_02239	0.33	+0.4
2,388,932	-		CCNA_02239	0.33	-0.8
2,388,932	-		CCNA_02239	0.33	-1.0
2,388,932	-		CCNA_02239	0.33	-0.2
2,388,932	-		CCNA_02239	0.33	+2.4
2,388,959	+		CCNA_02239	0.36	-2.3
2,388,967	-		CCNA_02239	0.36	-0.9
2,389,039	+		CCNA_02239	0.42	-1.7
2,389,064	+		CCNA_02239	0.45	+1.2
2,389,064	+		CCNA_02239	0.45	-0.8
2,389,064	+		CCNA_02239	0.45	+0.6
2,389,072	-		CCNA_02239	0.45	-0.3
2,389,149	+		CCNA_02239	0.52	+2.4
2,389,163	+				+0.8
2,389,173	-		CCNA_02239	0.54	-1.3
2,389,178	+		CCNA_02239	0.54	-0.4