Experiment: Carbenicillin 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19670 and ABZR86_RS19675 are separated by 140 nucleotides ABZR86_RS19675 and ABZR86_RS19680 are separated by 81 nucleotides ABZR86_RS19680 and ABZR86_RS19685 are separated by 306 nucleotides
ABZR86_RS19670: ABZR86_RS19670 - M13 family metallopeptidase, at 414,758 to 416,812
_RS19670
ABZR86_RS19675: ABZR86_RS19675 - TetR/AcrR family transcriptional regulator, at 416,953 to 417,555
_RS19675
ABZR86_RS19680: ABZR86_RS19680 - NADP-dependent oxidoreductase, at 417,637 to 418,668
_RS19680
ABZR86_RS19685: ABZR86_RS19685 - serine hydrolase domain-containing protein, at 418,975 to 420,330
_RS19685
Position (kb) 417
418
419 Strain fitness (log2 ratio) -2
-1
0
1 at 416.858 kb on + strand at 416.859 kb on - strand at 417.091 kb on + strand, within ABZR86_RS19675 at 417.091 kb on + strand, within ABZR86_RS19675 at 417.091 kb on + strand, within ABZR86_RS19675 at 417.092 kb on - strand, within ABZR86_RS19675 at 417.092 kb on - strand, within ABZR86_RS19675 at 417.092 kb on - strand, within ABZR86_RS19675 at 417.097 kb on + strand, within ABZR86_RS19675 at 417.097 kb on + strand, within ABZR86_RS19675 at 417.098 kb on - strand, within ABZR86_RS19675 at 417.098 kb on - strand, within ABZR86_RS19675 at 417.142 kb on + strand, within ABZR86_RS19675 at 417.142 kb on + strand, within ABZR86_RS19675 at 417.142 kb on + strand, within ABZR86_RS19675 at 417.142 kb on + strand, within ABZR86_RS19675 at 417.143 kb on - strand, within ABZR86_RS19675 at 417.143 kb on - strand, within ABZR86_RS19675 at 417.154 kb on + strand, within ABZR86_RS19675 at 417.155 kb on - strand, within ABZR86_RS19675 at 417.155 kb on - strand, within ABZR86_RS19675 at 417.166 kb on - strand, within ABZR86_RS19675 at 417.442 kb on + strand, within ABZR86_RS19675 at 417.479 kb on + strand, within ABZR86_RS19675 at 417.595 kb on - strand at 417.775 kb on + strand, within ABZR86_RS19680 at 417.775 kb on + strand, within ABZR86_RS19680 at 417.775 kb on + strand, within ABZR86_RS19680 at 417.775 kb on + strand, within ABZR86_RS19680 at 417.775 kb on + strand, within ABZR86_RS19680 at 417.775 kb on + strand, within ABZR86_RS19680 at 417.775 kb on + strand, within ABZR86_RS19680 at 417.776 kb on - strand, within ABZR86_RS19680 at 417.793 kb on + strand, within ABZR86_RS19680 at 417.793 kb on + strand, within ABZR86_RS19680 at 417.793 kb on + strand, within ABZR86_RS19680 at 417.794 kb on - strand, within ABZR86_RS19680 at 417.815 kb on + strand, within ABZR86_RS19680 at 417.830 kb on - strand, within ABZR86_RS19680 at 417.830 kb on - strand, within ABZR86_RS19680 at 417.830 kb on - strand, within ABZR86_RS19680 at 417.952 kb on + strand, within ABZR86_RS19680 at 417.952 kb on + strand, within ABZR86_RS19680 at 417.953 kb on - strand, within ABZR86_RS19680 at 418.051 kb on + strand, within ABZR86_RS19680 at 418.052 kb on - strand, within ABZR86_RS19680 at 418.201 kb on + strand, within ABZR86_RS19680 at 418.300 kb on + strand, within ABZR86_RS19680 at 418.393 kb on + strand, within ABZR86_RS19680 at 418.446 kb on + strand, within ABZR86_RS19680 at 418.446 kb on + strand, within ABZR86_RS19680 at 418.446 kb on + strand, within ABZR86_RS19680 at 418.446 kb on + strand, within ABZR86_RS19680 at 418.498 kb on + strand, within ABZR86_RS19680 at 418.499 kb on - strand, within ABZR86_RS19680 at 418.499 kb on - strand, within ABZR86_RS19680 at 418.909 kb on + strand at 419.072 kb on + strand at 419.072 kb on + strand at 419.073 kb on - strand at 419.073 kb on - strand at 419.093 kb on + strand at 419.093 kb on + strand at 419.096 kb on + strand at 419.096 kb on + strand at 419.096 kb on + strand at 419.097 kb on - strand at 419.097 kb on - strand at 419.097 kb on - strand at 419.101 kb on + strand at 419.101 kb on + strand at 419.101 kb on + strand at 419.102 kb on - strand at 419.184 kb on + strand, within ABZR86_RS19685 at 419.210 kb on + strand, within ABZR86_RS19685 at 419.211 kb on - strand, within ABZR86_RS19685 at 419.271 kb on - strand, within ABZR86_RS19685 at 419.381 kb on + strand, within ABZR86_RS19685 at 419.382 kb on - strand, within ABZR86_RS19685 at 419.387 kb on + strand, within ABZR86_RS19685 at 419.387 kb on + strand, within ABZR86_RS19685 at 419.387 kb on + strand, within ABZR86_RS19685 at 419.388 kb on - strand, within ABZR86_RS19685 at 419.465 kb on + strand, within ABZR86_RS19685
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.02 mg/ml remove 416,858 + -0.2 416,859 - -1.6 417,091 + ABZR86_RS19675 0.23 +0.4 417,091 + ABZR86_RS19675 0.23 -0.5 417,091 + ABZR86_RS19675 0.23 -0.2 417,092 - ABZR86_RS19675 0.23 +0.3 417,092 - ABZR86_RS19675 0.23 -0.1 417,092 - ABZR86_RS19675 0.23 -2.2 417,097 + ABZR86_RS19675 0.24 -0.1 417,097 + ABZR86_RS19675 0.24 -0.3 417,098 - ABZR86_RS19675 0.24 -0.4 417,098 - ABZR86_RS19675 0.24 +0.0 417,142 + ABZR86_RS19675 0.31 +1.1 417,142 + ABZR86_RS19675 0.31 +0.3 417,142 + ABZR86_RS19675 0.31 -0.4 417,142 + ABZR86_RS19675 0.31 +0.6 417,143 - ABZR86_RS19675 0.32 -0.6 417,143 - ABZR86_RS19675 0.32 -0.3 417,154 + ABZR86_RS19675 0.33 +0.6 417,155 - ABZR86_RS19675 0.33 -0.1 417,155 - ABZR86_RS19675 0.33 -2.1 417,166 - ABZR86_RS19675 0.35 +0.1 417,442 + ABZR86_RS19675 0.81 +0.3 417,479 + ABZR86_RS19675 0.87 +0.5 417,595 - +0.6 417,775 + ABZR86_RS19680 0.13 -0.6 417,775 + ABZR86_RS19680 0.13 -0.3 417,775 + ABZR86_RS19680 0.13 -0.2 417,775 + ABZR86_RS19680 0.13 -0.2 417,775 + ABZR86_RS19680 0.13 -0.7 417,775 + ABZR86_RS19680 0.13 +0.3 417,775 + ABZR86_RS19680 0.13 -0.5 417,776 - ABZR86_RS19680 0.13 -0.7 417,793 + ABZR86_RS19680 0.15 +0.7 417,793 + ABZR86_RS19680 0.15 -0.9 417,793 + ABZR86_RS19680 0.15 -0.8 417,794 - ABZR86_RS19680 0.15 -0.8 417,815 + ABZR86_RS19680 0.17 -0.0 417,830 - ABZR86_RS19680 0.19 +0.3 417,830 - ABZR86_RS19680 0.19 -0.7 417,830 - ABZR86_RS19680 0.19 -0.3 417,952 + ABZR86_RS19680 0.31 -1.2 417,952 + ABZR86_RS19680 0.31 -0.1 417,953 - ABZR86_RS19680 0.31 -0.1 418,051 + ABZR86_RS19680 0.40 +0.2 418,052 - ABZR86_RS19680 0.40 -0.2 418,201 + ABZR86_RS19680 0.55 -0.6 418,300 + ABZR86_RS19680 0.64 +0.3 418,393 + ABZR86_RS19680 0.73 -0.1 418,446 + ABZR86_RS19680 0.78 +0.2 418,446 + ABZR86_RS19680 0.78 -0.0 418,446 + ABZR86_RS19680 0.78 +0.3 418,446 + ABZR86_RS19680 0.78 +0.5 418,498 + ABZR86_RS19680 0.83 +0.8 418,499 - ABZR86_RS19680 0.84 -0.6 418,499 - ABZR86_RS19680 0.84 +0.4 418,909 + -0.1 419,072 + +0.5 419,072 + +0.0 419,073 - +0.9 419,073 - +0.1 419,093 + -0.2 419,093 + -0.7 419,096 + +0.9 419,096 + -0.4 419,096 + +0.4 419,097 - -0.2 419,097 - +0.6 419,097 - -0.2 419,101 + -0.7 419,101 + -1.2 419,101 + -0.3 419,102 - +0.3 419,184 + ABZR86_RS19685 0.15 +0.1 419,210 + ABZR86_RS19685 0.17 -0.8 419,211 - ABZR86_RS19685 0.17 -0.3 419,271 - ABZR86_RS19685 0.22 -1.0 419,381 + ABZR86_RS19685 0.30 -0.2 419,382 - ABZR86_RS19685 0.30 -0.1 419,387 + ABZR86_RS19685 0.30 -0.3 419,387 + ABZR86_RS19685 0.30 -0.5 419,387 + ABZR86_RS19685 0.30 +0.6 419,388 - ABZR86_RS19685 0.30 -0.9 419,465 + ABZR86_RS19685 0.36 -0.4
Or see this region's nucleotide sequence