Experiment: Carbenicillin 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18800 and ABZR86_RS18805 overlap by 1 nucleotides ABZR86_RS18805 and ABZR86_RS18810 are separated by 13 nucleotides
ABZR86_RS18800: ABZR86_RS18800 - glycosyltransferase family 2 protein, at 188,463 to 189,455
_RS18800
ABZR86_RS18805: ABZR86_RS18805 - hypothetical protein, at 189,455 to 189,907
_RS18805
ABZR86_RS18810: ABZR86_RS18810 - methyltransferase domain-containing protein, at 189,921 to 190,841
_RS18810
Position (kb) 189
190 Strain fitness (log2 ratio) -1
0
1 at 188.474 kb on + strand at 188.474 kb on + strand at 188.474 kb on + strand at 188.474 kb on + strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.475 kb on - strand at 188.518 kb on - strand at 188.706 kb on + strand, within ABZR86_RS18800 at 188.706 kb on + strand, within ABZR86_RS18800 at 188.707 kb on - strand, within ABZR86_RS18800 at 188.824 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.046 kb on - strand, within ABZR86_RS18800 at 189.099 kb on + strand, within ABZR86_RS18800 at 189.099 kb on + strand, within ABZR86_RS18800 at 189.162 kb on - strand, within ABZR86_RS18800 at 189.162 kb on - strand, within ABZR86_RS18800 at 189.189 kb on + strand, within ABZR86_RS18800 at 189.189 kb on + strand, within ABZR86_RS18800 at 189.190 kb on - strand, within ABZR86_RS18800 at 189.190 kb on - strand, within ABZR86_RS18800 at 189.190 kb on - strand, within ABZR86_RS18800 at 189.390 kb on + strand at 189.390 kb on + strand at 189.390 kb on + strand at 189.391 kb on - strand at 189.391 kb on - strand at 189.391 kb on - strand at 189.427 kb on + strand at 189.427 kb on + strand at 189.428 kb on - strand at 189.428 kb on - strand at 189.551 kb on - strand, within ABZR86_RS18805 at 189.735 kb on - strand, within ABZR86_RS18805 at 189.838 kb on - strand, within ABZR86_RS18805 at 189.936 kb on + strand at 189.936 kb on + strand at 189.936 kb on + strand at 189.936 kb on + strand at 189.937 kb on - strand at 189.937 kb on - strand at 189.937 kb on - strand at 190.036 kb on + strand, within ABZR86_RS18810 at 190.037 kb on - strand, within ABZR86_RS18810 at 190.037 kb on - strand, within ABZR86_RS18810 at 190.037 kb on - strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.087 kb on + strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.088 kb on - strand, within ABZR86_RS18810 at 190.219 kb on + strand, within ABZR86_RS18810 at 190.229 kb on + strand, within ABZR86_RS18810 at 190.256 kb on - strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.444 kb on + strand, within ABZR86_RS18810 at 190.445 kb on - strand, within ABZR86_RS18810 at 190.445 kb on - strand, within ABZR86_RS18810 at 190.543 kb on + strand, within ABZR86_RS18810 at 190.594 kb on + strand, within ABZR86_RS18810 at 190.594 kb on + strand, within ABZR86_RS18810 at 190.595 kb on - strand, within ABZR86_RS18810 at 190.595 kb on - strand, within ABZR86_RS18810 at 190.673 kb on - strand, within ABZR86_RS18810 at 190.684 kb on + strand, within ABZR86_RS18810 at 190.684 kb on + strand, within ABZR86_RS18810 at 190.723 kb on - strand, within ABZR86_RS18810 at 190.738 kb on + strand, within ABZR86_RS18810 at 190.738 kb on + strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.765 kb on + strand at 190.765 kb on + strand at 190.765 kb on + strand at 190.765 kb on + strand at 190.766 kb on - strand at 190.766 kb on - strand at 190.768 kb on + strand at 190.768 kb on + strand at 190.769 kb on - strand at 190.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.02 mg/ml remove 188,474 + +0.2 188,474 + +0.2 188,474 + -0.5 188,474 + -0.2 188,475 - +0.2 188,475 - +0.2 188,475 - -0.3 188,475 - +0.3 188,475 - -0.1 188,475 - -0.7 188,475 - -0.7 188,475 - +0.3 188,475 - -0.3 188,475 - -0.7 188,518 - -1.6 188,706 + ABZR86_RS18800 0.24 +0.7 188,706 + ABZR86_RS18800 0.24 +0.4 188,707 - ABZR86_RS18800 0.25 +0.7 188,824 - ABZR86_RS18800 0.36 +0.3 189,046 - ABZR86_RS18800 0.59 -0.2 189,046 - ABZR86_RS18800 0.59 +0.3 189,046 - ABZR86_RS18800 0.59 -0.1 189,046 - ABZR86_RS18800 0.59 -0.3 189,046 - ABZR86_RS18800 0.59 +0.8 189,099 + ABZR86_RS18800 0.64 -0.1 189,099 + ABZR86_RS18800 0.64 -1.1 189,162 - ABZR86_RS18800 0.70 +0.5 189,162 - ABZR86_RS18800 0.70 -0.8 189,189 + ABZR86_RS18800 0.73 -0.2 189,189 + ABZR86_RS18800 0.73 -0.1 189,190 - ABZR86_RS18800 0.73 -0.1 189,190 - ABZR86_RS18800 0.73 +0.3 189,190 - ABZR86_RS18800 0.73 +0.6 189,390 + -0.0 189,390 + -0.3 189,390 + -0.7 189,391 - -0.4 189,391 - -0.8 189,391 - -0.7 189,427 + +0.3 189,427 + -0.3 189,428 - +0.5 189,428 - -0.1 189,551 - ABZR86_RS18805 0.21 +0.6 189,735 - ABZR86_RS18805 0.62 -0.7 189,838 - ABZR86_RS18805 0.85 +1.4 189,936 + -0.4 189,936 + -0.0 189,936 + -0.5 189,936 + +0.1 189,937 - -0.2 189,937 - -1.1 189,937 - -0.4 190,036 + ABZR86_RS18810 0.12 +0.2 190,037 - ABZR86_RS18810 0.13 +0.2 190,037 - ABZR86_RS18810 0.13 -0.8 190,037 - ABZR86_RS18810 0.13 -0.4 190,087 + ABZR86_RS18810 0.18 -0.2 190,087 + ABZR86_RS18810 0.18 -0.0 190,087 + ABZR86_RS18810 0.18 -0.2 190,087 + ABZR86_RS18810 0.18 -0.6 190,088 - ABZR86_RS18810 0.18 +0.4 190,088 - ABZR86_RS18810 0.18 -0.5 190,088 - ABZR86_RS18810 0.18 -0.3 190,088 - ABZR86_RS18810 0.18 -0.4 190,088 - ABZR86_RS18810 0.18 +0.1 190,219 + ABZR86_RS18810 0.32 -0.7 190,229 + ABZR86_RS18810 0.33 -0.1 190,256 - ABZR86_RS18810 0.36 -0.1 190,279 + ABZR86_RS18810 0.39 +0.7 190,279 + ABZR86_RS18810 0.39 +0.2 190,279 + ABZR86_RS18810 0.39 +0.6 190,280 - ABZR86_RS18810 0.39 +0.1 190,280 - ABZR86_RS18810 0.39 -0.0 190,280 - ABZR86_RS18810 0.39 +0.2 190,444 + ABZR86_RS18810 0.57 +0.1 190,445 - ABZR86_RS18810 0.57 +0.0 190,445 - ABZR86_RS18810 0.57 -0.4 190,543 + ABZR86_RS18810 0.68 -0.5 190,594 + ABZR86_RS18810 0.73 -1.1 190,594 + ABZR86_RS18810 0.73 +0.2 190,595 - ABZR86_RS18810 0.73 +0.9 190,595 - ABZR86_RS18810 0.73 -0.0 190,673 - ABZR86_RS18810 0.82 -0.7 190,684 + ABZR86_RS18810 0.83 -0.5 190,684 + ABZR86_RS18810 0.83 -0.4 190,723 - ABZR86_RS18810 0.87 -0.0 190,738 + ABZR86_RS18810 0.89 +0.1 190,738 + ABZR86_RS18810 0.89 +0.1 190,739 - ABZR86_RS18810 0.89 -0.8 190,739 - ABZR86_RS18810 0.89 -0.2 190,739 - ABZR86_RS18810 0.89 +0.0 190,739 - ABZR86_RS18810 0.89 -0.4 190,739 - ABZR86_RS18810 0.89 +0.2 190,765 + -0.6 190,765 + -0.6 190,765 + +0.2 190,765 + +0.8 190,766 - +0.1 190,766 - -0.7 190,768 + +0.4 190,768 + +0.0 190,769 - -0.2 190,775 - -0.8
Or see this region's nucleotide sequence