Experiment: Carbenicillin 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00740 and ABZR86_RS00745 are separated by 112 nucleotides ABZR86_RS00745 and ABZR86_RS00750 are separated by 40 nucleotides ABZR86_RS00750 and ABZR86_RS00755 are separated by 61 nucleotides
ABZR86_RS00740: ABZR86_RS00740 - isocitrate dehydrogenase, at 146,145 to 147,161
_RS00740
ABZR86_RS00745: ABZR86_RS00745 - carboxymuconolactone decarboxylase family protein, at 147,274 to 147,732
_RS00745
ABZR86_RS00750: ABZR86_RS00750 - RNA polymerase sigma factor SigJ, at 147,773 to 148,672
_RS00750
ABZR86_RS00755: ABZR86_RS00755 - aspartyl/asparaginyl beta-hydroxylase domain-containing protein, at 148,734 to 149,678
_RS00755
Position (kb) 147
148
149 Strain fitness (log2 ratio) -1
0
1 at 147.296 kb on + strand at 147.312 kb on + strand at 147.313 kb on - strand at 147.413 kb on + strand, within ABZR86_RS00745 at 147.413 kb on + strand, within ABZR86_RS00745 at 147.413 kb on + strand, within ABZR86_RS00745 at 147.414 kb on - strand, within ABZR86_RS00745 at 147.497 kb on + strand, within ABZR86_RS00745 at 147.497 kb on + strand, within ABZR86_RS00745 at 147.497 kb on + strand, within ABZR86_RS00745 at 147.498 kb on - strand, within ABZR86_RS00745 at 147.498 kb on - strand, within ABZR86_RS00745 at 147.498 kb on - strand, within ABZR86_RS00745 at 147.590 kb on + strand, within ABZR86_RS00745 at 147.590 kb on + strand, within ABZR86_RS00745 at 147.591 kb on - strand, within ABZR86_RS00745 at 147.591 kb on - strand, within ABZR86_RS00745 at 147.591 kb on - strand, within ABZR86_RS00745 at 147.591 kb on - strand, within ABZR86_RS00745 at 147.979 kb on + strand, within ABZR86_RS00750 at 147.979 kb on + strand, within ABZR86_RS00750 at 147.979 kb on + strand, within ABZR86_RS00750 at 148.284 kb on + strand, within ABZR86_RS00750 at 148.284 kb on + strand, within ABZR86_RS00750 at 148.285 kb on - strand, within ABZR86_RS00750 at 148.285 kb on - strand, within ABZR86_RS00750 at 148.285 kb on - strand, within ABZR86_RS00750 at 148.443 kb on + strand, within ABZR86_RS00750 at 148.444 kb on - strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.577 kb on + strand, within ABZR86_RS00750 at 148.578 kb on - strand, within ABZR86_RS00750 at 148.578 kb on - strand, within ABZR86_RS00750 at 148.578 kb on - strand, within ABZR86_RS00750 at 148.578 kb on - strand, within ABZR86_RS00750 at 148.614 kb on + strand at 148.615 kb on - strand at 148.751 kb on - strand at 148.795 kb on + strand at 148.795 kb on + strand at 148.796 kb on - strand at 148.796 kb on - strand at 148.796 kb on - strand at 148.796 kb on - strand at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.059 kb on + strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.060 kb on - strand, within ABZR86_RS00755 at 149.164 kb on + strand, within ABZR86_RS00755 at 149.165 kb on - strand, within ABZR86_RS00755 at 149.317 kb on + strand, within ABZR86_RS00755 at 149.318 kb on - strand, within ABZR86_RS00755 at 149.329 kb on + strand, within ABZR86_RS00755 at 149.330 kb on - strand, within ABZR86_RS00755 at 149.524 kb on + strand, within ABZR86_RS00755 at 149.524 kb on + strand, within ABZR86_RS00755 at 149.524 kb on + strand, within ABZR86_RS00755 at 149.524 kb on + strand, within ABZR86_RS00755 at 149.524 kb on + strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.525 kb on - strand, within ABZR86_RS00755 at 149.539 kb on + strand, within ABZR86_RS00755 at 149.539 kb on + strand, within ABZR86_RS00755 at 149.539 kb on + strand, within ABZR86_RS00755 at 149.540 kb on - strand, within ABZR86_RS00755 at 149.540 kb on - strand, within ABZR86_RS00755 at 149.540 kb on - strand, within ABZR86_RS00755 at 149.625 kb on + strand at 149.625 kb on + strand at 149.626 kb on - strand at 149.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.02 mg/ml remove 147,296 + -0.0 147,312 + -0.3 147,313 - +0.4 147,413 + ABZR86_RS00745 0.30 +0.4 147,413 + ABZR86_RS00745 0.30 +0.1 147,413 + ABZR86_RS00745 0.30 +0.6 147,414 - ABZR86_RS00745 0.31 +0.3 147,497 + ABZR86_RS00745 0.49 -0.2 147,497 + ABZR86_RS00745 0.49 -0.2 147,497 + ABZR86_RS00745 0.49 +0.2 147,498 - ABZR86_RS00745 0.49 +0.5 147,498 - ABZR86_RS00745 0.49 +0.4 147,498 - ABZR86_RS00745 0.49 +0.0 147,590 + ABZR86_RS00745 0.69 -0.1 147,590 + ABZR86_RS00745 0.69 -0.4 147,591 - ABZR86_RS00745 0.69 +1.4 147,591 - ABZR86_RS00745 0.69 -0.1 147,591 - ABZR86_RS00745 0.69 +0.6 147,591 - ABZR86_RS00745 0.69 +0.2 147,979 + ABZR86_RS00750 0.23 +0.8 147,979 + ABZR86_RS00750 0.23 -1.0 147,979 + ABZR86_RS00750 0.23 +0.4 148,284 + ABZR86_RS00750 0.57 +0.3 148,284 + ABZR86_RS00750 0.57 -0.1 148,285 - ABZR86_RS00750 0.57 -0.2 148,285 - ABZR86_RS00750 0.57 +0.0 148,285 - ABZR86_RS00750 0.57 -1.0 148,443 + ABZR86_RS00750 0.74 -1.2 148,444 - ABZR86_RS00750 0.75 -0.1 148,577 + ABZR86_RS00750 0.89 +0.3 148,577 + ABZR86_RS00750 0.89 -0.8 148,577 + ABZR86_RS00750 0.89 -0.0 148,577 + ABZR86_RS00750 0.89 +0.4 148,577 + ABZR86_RS00750 0.89 -0.5 148,577 + ABZR86_RS00750 0.89 -0.4 148,577 + ABZR86_RS00750 0.89 -1.0 148,578 - ABZR86_RS00750 0.89 -0.2 148,578 - ABZR86_RS00750 0.89 +0.3 148,578 - ABZR86_RS00750 0.89 -1.3 148,578 - ABZR86_RS00750 0.89 -0.9 148,614 + -0.0 148,615 - -0.3 148,751 - -0.5 148,795 + +0.9 148,795 + +0.0 148,796 - +0.5 148,796 - -1.1 148,796 - +0.3 148,796 - +0.0 149,059 + ABZR86_RS00755 0.34 -0.0 149,059 + ABZR86_RS00755 0.34 -0.0 149,059 + ABZR86_RS00755 0.34 -0.2 149,059 + ABZR86_RS00755 0.34 +0.0 149,059 + ABZR86_RS00755 0.34 +1.1 149,059 + ABZR86_RS00755 0.34 -0.0 149,059 + ABZR86_RS00755 0.34 -0.1 149,059 + ABZR86_RS00755 0.34 +0.1 149,059 + ABZR86_RS00755 0.34 +0.3 149,059 + ABZR86_RS00755 0.34 -0.4 149,059 + ABZR86_RS00755 0.34 -0.6 149,059 + ABZR86_RS00755 0.34 -0.1 149,059 + ABZR86_RS00755 0.34 +0.8 149,059 + ABZR86_RS00755 0.34 +0.6 149,059 + ABZR86_RS00755 0.34 -0.9 149,059 + ABZR86_RS00755 0.34 -0.1 149,060 - ABZR86_RS00755 0.34 +0.7 149,060 - ABZR86_RS00755 0.34 -0.3 149,060 - ABZR86_RS00755 0.34 -0.0 149,060 - ABZR86_RS00755 0.34 +1.0 149,060 - ABZR86_RS00755 0.34 +0.1 149,060 - ABZR86_RS00755 0.34 +0.2 149,060 - ABZR86_RS00755 0.34 -0.2 149,060 - ABZR86_RS00755 0.34 -0.0 149,060 - ABZR86_RS00755 0.34 +0.3 149,164 + ABZR86_RS00755 0.46 -0.1 149,165 - ABZR86_RS00755 0.46 +0.1 149,317 + ABZR86_RS00755 0.62 -0.4 149,318 - ABZR86_RS00755 0.62 +0.1 149,329 + ABZR86_RS00755 0.63 +0.0 149,330 - ABZR86_RS00755 0.63 +0.1 149,524 + ABZR86_RS00755 0.84 -1.1 149,524 + ABZR86_RS00755 0.84 -0.1 149,524 + ABZR86_RS00755 0.84 -0.5 149,524 + ABZR86_RS00755 0.84 +0.0 149,524 + ABZR86_RS00755 0.84 -0.6 149,525 - ABZR86_RS00755 0.84 +0.3 149,525 - ABZR86_RS00755 0.84 +0.6 149,525 - ABZR86_RS00755 0.84 -0.3 149,525 - ABZR86_RS00755 0.84 -0.2 149,525 - ABZR86_RS00755 0.84 +0.6 149,525 - ABZR86_RS00755 0.84 -0.1 149,525 - ABZR86_RS00755 0.84 +0.1 149,525 - ABZR86_RS00755 0.84 -0.2 149,525 - ABZR86_RS00755 0.84 +0.2 149,539 + ABZR86_RS00755 0.85 -0.3 149,539 + ABZR86_RS00755 0.85 -0.2 149,539 + ABZR86_RS00755 0.85 -1.3 149,540 - ABZR86_RS00755 0.85 -0.8 149,540 - ABZR86_RS00755 0.85 +0.3 149,540 - ABZR86_RS00755 0.85 +0.1 149,625 + +0.9 149,625 + -0.1 149,626 - -0.5 149,626 - -0.0
Or see this region's nucleotide sequence