Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1357

Experiment: Chlorate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorate 20 mM
1,390,526	+		Synpcc7942_1355	0.87	+1.5
1,390,572	-		Synpcc7942_1355	0.88	-0.1
1,390,608	-		Synpcc7942_1355	0.90	-0.3
1,390,785	+				+2.3
1,390,811	-				+0.6
1,390,813	-				-1.0
1,390,824	+				+0.7
1,390,861	+				-2.3
1,390,875	+				-0.3
1,390,894	+				+1.8
1,390,894	+				-0.0
1,390,929	+				-2.9
1,390,953	+		Synpcc7942_1356	0.13	-1.3
1,390,991	-		Synpcc7942_1356	0.21	+0.3
1,391,035	-		Synpcc7942_1356	0.31	+0.3
1,391,044	-		Synpcc7942_1356	0.33	+1.3
1,391,057	-		Synpcc7942_1356	0.36	-0.3
1,391,105	-		Synpcc7942_1356	0.46	+1.2
1,391,189	+		Synpcc7942_1356	0.64	-2.3
1,391,190	+		Synpcc7942_1356	0.65	-1.3
1,391,197	-		Synpcc7942_1356	0.66	+0.1
1,391,198	-		Synpcc7942_1356	0.66	+0.6
1,391,214	-		Synpcc7942_1356	0.70	+2.8
1,391,216	+		Synpcc7942_1356	0.70	+0.6
1,391,244	+		Synpcc7942_1356	0.77	+1.2
1,391,262	+		Synpcc7942_1356	0.80	+0.3
1,391,272	+		Synpcc7942_1356	0.83	+0.7
1,391,280	-		Synpcc7942_1356	0.84	+1.1
1,391,284	+		Synpcc7942_1356	0.85	+1.9
1,391,297	-		Synpcc7942_1356	0.88	-1.9
1,391,330	+				+2.2
1,391,337	+				-0.1
1,391,337	+				-1.3
1,391,337	+				+0.1
1,391,345	-				+0.9
1,391,345	-				+1.5
1,391,345	-				+1.5
1,391,345	-				-1.3
1,391,345	-				+1.7
1,391,395	+				+1.4
1,391,395	+				+0.5
1,391,395	+				-0.5
1,391,474	-				+1.7
1,391,534	+				+3.7
1,391,534	+				+0.3
1,391,542	-				+2.8
1,391,591	+				+0.3
1,391,606	+				+1.1
1,391,614	-				-1.3
1,391,629	+				+0.3
1,391,667	-				+0.3
1,391,701	+				-0.7
1,391,701	+				+3.1
1,391,704	-				+0.7
1,391,709	-				-0.3
1,391,709	-				-0.3
1,391,709	-				-0.3
1,391,710	-				-0.9
1,391,714	+				-1.3
1,391,751	-				+1.6
1,391,752	-				+1.5
1,391,770	+				+0.3
1,391,770	+				+0.2
1,391,778	-				-0.9
1,391,782	+				-1.3
1,391,782	+				+1.5
1,391,801	+				+1.1
1,391,802	-				+0.1
1,391,807	-				-0.3
1,391,830	-				-0.3
1,391,835	+				+2.8
1,391,890	+		Synpcc7942_1357	0.10	-0.6
1,391,890	+		Synpcc7942_1357	0.10	+1.9
1,391,891	+		Synpcc7942_1357	0.10	+1.5
1,391,899	-		Synpcc7942_1357	0.10	-0.5
1,391,899	-		Synpcc7942_1357	0.10	+1.7
1,391,935	+		Synpcc7942_1357	0.11	-1.8
1,391,985	+		Synpcc7942_1357	0.12	+1.5
1,391,985	+		Synpcc7942_1357	0.12	-0.2
1,392,006	-		Synpcc7942_1357	0.12	-1.3
1,392,030	+		Synpcc7942_1357	0.13	+0.9
1,392,032	-				+1.5
1,392,039	+		Synpcc7942_1357	0.13	+1.9
1,392,039	+		Synpcc7942_1357	0.13	+1.1
1,392,121	+		Synpcc7942_1357	0.14	+1.6
1,392,121	+		Synpcc7942_1357	0.14	+2.3
1,392,139	-		Synpcc7942_1357	0.15	+1.0
1,392,144	+		Synpcc7942_1357	0.15	+0.7
1,392,144	+		Synpcc7942_1357	0.15	-0.9
1,392,165	-		Synpcc7942_1357	0.15	-1.3
1,392,165	-		Synpcc7942_1357	0.15	-2.6
1,392,173	-		Synpcc7942_1357	0.15	-1.9
1,392,191	+		Synpcc7942_1357	0.16	-0.1
1,392,201	+		Synpcc7942_1357	0.16	+1.8
1,392,275	-		Synpcc7942_1357	0.17	-0.5
1,392,306	+		Synpcc7942_1357	0.18	-0.6
1,392,311	+		Synpcc7942_1357	0.18	-2.6
1,392,314	-		Synpcc7942_1357	0.18	-1.3
1,392,314	-		Synpcc7942_1357	0.18	+0.9
1,392,314	-		Synpcc7942_1357	0.18	-0.3
1,392,414	+		Synpcc7942_1357	0.20	+1.5
1,392,505	+		Synpcc7942_1357	0.21	-0.3
1,392,521	-		Synpcc7942_1357	0.22	+0.3
1,392,549	-		Synpcc7942_1357	0.22	+0.7
1,392,579	+		Synpcc7942_1357	0.23	-1.3
1,392,579	+		Synpcc7942_1357	0.23	+1.9
1,392,590	-		Synpcc7942_1357	0.23	+1.5
1,392,593	+		Synpcc7942_1357	0.23	-0.3
1,392,628	+		Synpcc7942_1357	0.24	+1.4
1,392,629	+		Synpcc7942_1357	0.24	+0.4
1,392,636	+		Synpcc7942_1357	0.24	-1.3
1,392,636	+		Synpcc7942_1357	0.24	+0.2
1,392,636	+		Synpcc7942_1357	0.24	+2.5
1,392,644	-		Synpcc7942_1357	0.24	+2.4
1,392,644	-		Synpcc7942_1357	0.24	+1.6
1,392,674	+		Synpcc7942_1357	0.24	+0.3
1,392,680	-		Synpcc7942_1357	0.25	+1.3
1,392,687	+		Synpcc7942_1357	0.25	-0.9
1,392,750	+		Synpcc7942_1357	0.26	-2.6
1,392,757	+		Synpcc7942_1357	0.26	-1.7
1,392,758	-		Synpcc7942_1357	0.26	+2.0
1,392,758	-		Synpcc7942_1357	0.26	+1.3
1,392,775	-		Synpcc7942_1357	0.26	-0.4
1,392,847	-		Synpcc7942_1357	0.28	+2.4
1,392,847	-		Synpcc7942_1357	0.28	+2.0
1,392,877	+		Synpcc7942_1357	0.28	+2.4
1,392,877	+		Synpcc7942_1357	0.28	+1.6
1,392,877	+		Synpcc7942_1357	0.28	+1.2
1,392,879	+		Synpcc7942_1357	0.28	+1.3
1,392,887	-		Synpcc7942_1357	0.28	+0.7
1,392,887	-		Synpcc7942_1357	0.28	+2.4
1,392,889	+		Synpcc7942_1357	0.28	+0.4
1,392,889	+		Synpcc7942_1357	0.28	-0.3
1,392,889	+		Synpcc7942_1357	0.28	+2.4
1,392,897	-		Synpcc7942_1357	0.29	+2.5
1,392,910	-		Synpcc7942_1357	0.29	+1.4
1,393,015	-		Synpcc7942_1357	0.31	+2.5
1,393,029	+		Synpcc7942_1357	0.31	-1.3
1,393,037	-		Synpcc7942_1357	0.31	-1.7
1,393,037	-		Synpcc7942_1357	0.31	+0.1
1,393,047	-		Synpcc7942_1357	0.31	+1.2
1,393,064	+		Synpcc7942_1357	0.32	+0.5
1,393,108	+		Synpcc7942_1357	0.32	-0.0
1,393,122	+		Synpcc7942_1357	0.33	+2.5
1,393,132	-		Synpcc7942_1357	0.33	-0.3
1,393,150	+		Synpcc7942_1357	0.33	+1.8
1,393,170	+		Synpcc7942_1357	0.34	+0.6
1,393,172	+		Synpcc7942_1357	0.34	+0.7
1,393,178	-		Synpcc7942_1357	0.34	+0.3
1,393,243	-		Synpcc7942_1357	0.35	+0.9
1,393,282	+		Synpcc7942_1357	0.36	-1.3
1,393,297	+		Synpcc7942_1357	0.36	+1.0
1,393,297	+		Synpcc7942_1357	0.36	-2.3
1,393,311	+		Synpcc7942_1357	0.36	+0.6
1,393,363	-		Synpcc7942_1357	0.37	-1.6
1,393,365	+		Synpcc7942_1357	0.37	-2.3
1,393,370	+		Synpcc7942_1357	0.37	+0.0
1,393,375	+		Synpcc7942_1357	0.37	+1.4
1,393,375	+		Synpcc7942_1357	0.37	+2.3
1,393,383	-		Synpcc7942_1357	0.38	+0.3
1,393,383	-		Synpcc7942_1357	0.38	+1.2
1,393,396	-		Synpcc7942_1357	0.38	-1.3
1,393,437	+		Synpcc7942_1357	0.39	+1.2
1,393,439	+		Synpcc7942_1357	0.39	+1.3
1,393,439	+		Synpcc7942_1357	0.39	+1.5
1,393,439	+		Synpcc7942_1357	0.39	+0.1
1,393,439	+		Synpcc7942_1357	0.39	+2.5
1,393,439	+		Synpcc7942_1357	0.39	-0.7
1,393,445	-		Synpcc7942_1357	0.39	+1.2
1,393,447	-		Synpcc7942_1357	0.39	+0.8
1,393,447	-		Synpcc7942_1357	0.39	-2.9
1,393,447	-		Synpcc7942_1357	0.39	+2.0
1,393,447	-		Synpcc7942_1357	0.39	+0.1
1,393,447	-		Synpcc7942_1357	0.39	+0.3
1,393,496	+		Synpcc7942_1357	0.40	-2.9
1,393,496	+		Synpcc7942_1357	0.40	+1.4
1,393,509	-		Synpcc7942_1357	0.40	+1.0
1,393,514	-		Synpcc7942_1357	0.40	+2.1
1,393,541	+		Synpcc7942_1357	0.40	+2.5
1,393,654	+		Synpcc7942_1357	0.43	-1.3
1,393,853	+		Synpcc7942_1357	0.46	+0.3
1,393,918	-		Synpcc7942_1357	0.47	+1.9
1,393,919	-		Synpcc7942_1357	0.47	+0.5
1,393,919	-		Synpcc7942_1357	0.47	-0.3
1,393,969	+		Synpcc7942_1357	0.48	+1.5
1,394,022	+		Synpcc7942_1357	0.49	+0.8
1,394,024	+		Synpcc7942_1357	0.49	-1.4
1,394,024	+		Synpcc7942_1357	0.49	+2.3
1,394,197	-		Synpcc7942_1357	0.53	+0.5
1,394,345	+		Synpcc7942_1357	0.55	+1.2
1,394,348	-		Synpcc7942_1357	0.55	-0.3
1,394,416	+		Synpcc7942_1357	0.57	-0.3
1,394,475	+		Synpcc7942_1357	0.58	-0.7
1,394,483	-		Synpcc7942_1357	0.58	-0.1
1,394,532	+		Synpcc7942_1357	0.59	+0.9
1,394,540	-		Synpcc7942_1357	0.59	+0.5
1,394,540	-		Synpcc7942_1357	0.59	+0.0
1,394,550	-		Synpcc7942_1357	0.59	-1.0
1,394,602	+		Synpcc7942_1357	0.60	-0.4
1,394,605	-		Synpcc7942_1357	0.60	+0.3
1,394,607	+		Synpcc7942_1357	0.60	+0.7
1,394,632	+		Synpcc7942_1357	0.61	+0.2
1,394,743	+		Synpcc7942_1357	0.63	-1.3
1,394,743	+		Synpcc7942_1357	0.63	-1.3
1,394,752	-		Synpcc7942_1357	0.63	+2.8
1,394,826	+		Synpcc7942_1357	0.64	+1.2
1,394,826	+		Synpcc7942_1357	0.64	-0.3
1,394,826	+		Synpcc7942_1357	0.64	+1.4
1,394,833	+		Synpcc7942_1357	0.64	-1.0
1,394,833	-		Synpcc7942_1357	0.64	-0.3
1,394,835	+		Synpcc7942_1357	0.64	-0.1
1,394,928	-		Synpcc7942_1357	0.66	+3.3
1,394,928	-		Synpcc7942_1357	0.66	+0.6
1,395,054	+		Synpcc7942_1357	0.68	+1.2
1,395,055	+		Synpcc7942_1357	0.68	+0.2
1,395,055	+		Synpcc7942_1357	0.68	+1.8
1,395,074	+		Synpcc7942_1357	0.69	+0.9
1,395,074	+		Synpcc7942_1357	0.69	-2.3
1,395,082	-		Synpcc7942_1357	0.69	+1.7
1,395,156	+		Synpcc7942_1357	0.70	+0.9
1,395,164	-		Synpcc7942_1357	0.70	+1.7
1,395,264	+		Synpcc7942_1357	0.72	+1.7
1,395,271	+		Synpcc7942_1357	0.72	+0.2
1,395,271	+		Synpcc7942_1357	0.72	+1.3
1,395,272	-		Synpcc7942_1357	0.72	-0.2
1,395,272	-		Synpcc7942_1357	0.72	+1.1
1,395,291	-		Synpcc7942_1357	0.73	+0.3
1,395,324	+		Synpcc7942_1357	0.73	-0.9
1,395,604	+		Synpcc7942_1357	0.78	-1.3
1,395,637	+		Synpcc7942_1357	0.79	-0.8
1,395,708	+		Synpcc7942_1357	0.80	+0.5
1,395,749	-		Synpcc7942_1357	0.81	+0.5
1,395,751	+		Synpcc7942_1357	0.81	-0.7
1,395,756	+		Synpcc7942_1357	0.81	+0.2
1,395,756	+		Synpcc7942_1357	0.81	+1.7
1,395,764	-		Synpcc7942_1357	0.81	-0.3
1,395,769	+		Synpcc7942_1357	0.82	+1.5
1,395,769	+		Synpcc7942_1357	0.82	-0.9
1,395,770	-		Synpcc7942_1357	0.82	+1.9
1,395,788	-		Synpcc7942_1357	0.82	+0.3
1,395,844	-		Synpcc7942_1357	0.83	+2.8
1,395,903	-		Synpcc7942_1357	0.84	+0.5
1,395,919	+		Synpcc7942_1357	0.84	-0.6
1,395,934	-		Synpcc7942_1357	0.85	+2.3
1,396,008	-		Synpcc7942_1357	0.86	-0.3
1,396,034	+		Synpcc7942_1357	0.86	-3.3
1,396,047	-		Synpcc7942_1357	0.87	-0.7
1,396,177	-		Synpcc7942_1357	0.89	+1.5
1,396,278	-				+1.1
1,396,707	-				+1.9
1,396,707	-				+2.1
1,396,719	-				-0.3
1,396,805	+				+1.9
1,396,811	-				+1.6
1,396,834	-				+0.6
1,396,959	+				+2.2
1,396,969	+				-1.3
1,397,009	+				+0.7
1,397,009	+				+2.3
1,397,009	+				+0.1
1,397,178	+		Synpcc7942_1358	0.11	+0.5
1,397,218	-				-1.3
1,397,218	-		Synpcc7942_1358	0.17	-2.9
1,397,226	+		Synpcc7942_1358	0.18	+0.7
1,397,246	-		Synpcc7942_1358	0.20	+0.3
1,397,246	-		Synpcc7942_1358	0.20	-1.3
1,397,259	+		Synpcc7942_1358	0.22	-0.0
1,397,277	-		Synpcc7942_1358	0.24	-1.3
1,397,335	+		Synpcc7942_1358	0.31	-0.3
1,397,343	-		Synpcc7942_1358	0.32	+0.5
1,397,346	+		Synpcc7942_1358	0.33	-0.2
1,397,354	-		Synpcc7942_1358	0.34	+0.1
1,397,354	-		Synpcc7942_1358	0.34	-0.4
1,397,355	-		Synpcc7942_1358	0.34	-0.3
1,397,458	+		Synpcc7942_1358	0.47	-2.3
1,397,505	-		Synpcc7942_1358	0.53	-1.2
1,397,507	+		Synpcc7942_1358	0.53	+0.3
1,397,529	-		Synpcc7942_1358	0.56	+0.5
1,397,554	+		Synpcc7942_1358	0.59	-2.9
1,397,564	-		Synpcc7942_1358	0.60	+2.1
1,397,572	-		Synpcc7942_1358	0.61	+1.0
1,397,582	-		Synpcc7942_1358	0.62	-2.9
1,397,601	+		Synpcc7942_1358	0.65	-1.3
1,397,601	+		Synpcc7942_1358	0.65	-0.4
1,397,606	+		Synpcc7942_1358	0.66	-0.1
1,397,606	+		Synpcc7942_1358	0.66	-1.3
1,397,611	+		Synpcc7942_1358	0.66	+1.2
1,397,614	-		Synpcc7942_1358	0.67	-0.2
1,397,619	-		Synpcc7942_1358	0.67	-0.3
1,397,619	-		Synpcc7942_1358	0.67	-1.3
1,397,632	-		Synpcc7942_1358	0.69	-1.8
1,397,662	-		Synpcc7942_1358	0.73	-2.4
1,397,670	-		Synpcc7942_1358	0.74	-0.2
1,397,672	+		Synpcc7942_1358	0.74	-2.3
1,397,680	-		Synpcc7942_1358	0.75	-1.8
1,397,695	+		Synpcc7942_1358	0.77	-0.2
1,397,697	+		Synpcc7942_1358	0.77	-0.3
1,397,703	+		Synpcc7942_1358	0.78	+0.8
1,397,703	-		Synpcc7942_1358	0.78	+0.2
1,397,705	-		Synpcc7942_1358	0.78	+1.1
1,397,712	-		Synpcc7942_1358	0.79	-2.3
1,397,717	+		Synpcc7942_1358	0.80	+0.3
1,397,717	+		Synpcc7942_1358	0.80	-1.3
1,397,718	+		Synpcc7942_1358	0.80	-4.4
1,397,718	-		Synpcc7942_1358	0.80	+0.9
1,397,725	-		Synpcc7942_1358	0.81	-0.3
1,397,725	-		Synpcc7942_1358	0.81	-3.3
1,397,725	-		Synpcc7942_1358	0.81	-1.3
1,397,762	-		Synpcc7942_1358	0.85	-0.3
1,397,765	+		Synpcc7942_1358	0.86	-0.9