Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_831

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
951,554	+		Pf1N1B4_829	0.85	+1.5
951,554	+		Pf1N1B4_829	0.85	-0.5
951,554	+		Pf1N1B4_829	0.85	-1.7
951,555	-		Pf1N1B4_829	0.85	+0.7
951,555	-		Pf1N1B4_829	0.85	-0.4
951,555	-		Pf1N1B4_829	0.85	-0.1
951,605	-				+0.1
951,605	-				-1.6
951,729	-		Pf1N1B4_830	0.17	+0.4
951,973	+				+1.1
951,973	+				+0.8
951,973	+				+1.1
951,973	+				-1.2
951,973	+				+0.8
951,974	-				+0.2
951,974	-				+0.4
951,974	-				+0.1
951,974	-				+1.2
951,974	-				-0.9
951,974	-				-0.5
951,974	-				+0.7
952,061	+				-1.4
952,062	-				-1.9
952,062	-				-0.5
952,062	-				-1.2
952,062	-				-0.9
952,084	-				+0.5
952,084	-				-0.4
952,139	+				+1.3
952,140	-				-1.7
952,268	+				+1.1
952,268	+				+0.7
952,268	+				-1.5
952,268	+				+0.7
952,285	+				+0.1
952,285	+				-1.5
952,286	-				-0.1
952,340	-				+2.1
952,340	-				+2.7
952,419	+				+1.1
952,419	+				+0.4
952,419	+				-0.3
952,419	+				+0.4
952,420	-				+1.1
952,420	-				+0.7
952,439	-				+0.1
952,453	+				-0.1
952,453	+				-1.5
952,453	+				-0.5
952,454	-				+1.1
952,466	-				-1.2
952,466	-				+0.5
952,466	-				-0.2
952,476	+				-1.2
952,477	-				-0.5
952,610	-		Pf1N1B4_831	0.40	-1.2
952,802	+				-2.5
953,595	+				+0.4
953,596	-				+0.1
953,723	-		Pf1N1B4_833	0.15	+0.7
953,802	+		Pf1N1B4_833	0.18	-0.9