Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5973

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
420,192	+				-0.5
420,352	+				+2.5
420,352	+				+2.1
420,352	+				+0.2
420,353	-				-0.0
420,353	-				+1.1
420,353	-				-2.1
420,353	-				-0.5
420,507	-				-1.8
420,507	-				+1.5
420,720	-		Pf1N1B4_5972	0.33	+0.8
420,720	-		Pf1N1B4_5972	0.33	-0.2
420,729	-		Pf1N1B4_5972	0.35	-0.5
421,040	+		Pf1N1B4_5972	0.82	-2.5
421,041	-		Pf1N1B4_5972	0.82	+0.1
421,094	+		Pf1N1B4_5972	0.90	-0.3
421,095	-		Pf1N1B4_5972	0.90	-1.5
421,095	-		Pf1N1B4_5972	0.90	+1.5
421,098	-				-0.5
421,458	+		Pf1N1B4_5973	0.44	-1.8
421,470	+		Pf1N1B4_5973	0.46	-1.2
421,748	+		Pf1N1B4_5973	0.88	-1.1
421,748	+		Pf1N1B4_5973	0.88	+0.5
421,749	-		Pf1N1B4_5973	0.88	-2.2
421,753	-		Pf1N1B4_5973	0.89	+0.4
421,755	+		Pf1N1B4_5973	0.89	-2.1
421,755	+		Pf1N1B4_5973	0.89	-1.3
421,835	+				+0.0
421,835	+				+2.0
421,835	+				-0.2
421,835	+				-0.5
421,835	+				-0.7
421,835	+				+1.5
421,836	-				-0.1
421,836	-				-2.3
421,836	-				-0.7
421,839	+				+0.8
421,839	+				-0.5
421,839	+				+0.5
421,840	-				-1.5
421,840	-				-1.5
421,840	-				+1.5
421,840	-				+0.1
422,284	+				+1.5
422,285	-		Pf1N1B4_5974	0.65	-0.5
422,613	+				+0.5
422,613	+				+1.1
422,613	+				-0.3
422,614	-				-0.3
422,614	-				-0.5
422,698	+				-2.1
422,698	+				+1.1
422,698	+				-0.4
422,699	-				-0.5