Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5710

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
148,148	+		Pf1N1B4_5709	0.27	+0.0
148,148	+		Pf1N1B4_5709	0.27	-0.2
148,149	-		Pf1N1B4_5709	0.27	+0.2
148,278	+		Pf1N1B4_5709	0.37	-0.9
148,604	-		Pf1N1B4_5709	0.64	+0.4
148,664	-		Pf1N1B4_5709	0.69	-0.3
149,026	+				-0.1
149,121	-				+0.1
149,175	-		Pf1N1B4_5710	0.18	+0.7
149,219	+		Pf1N1B4_5710	0.26	+2.0
149,219	+		Pf1N1B4_5710	0.26	+0.2
149,526	+		Pf1N1B4_5710	0.81	+0.3
149,527	-		Pf1N1B4_5710	0.81	-1.3
149,732	-				+1.2
149,856	+				-2.6
150,374	+		Pf1N1B4_5711	0.39	+0.2
150,374	+		Pf1N1B4_5711	0.39	-0.1
150,374	+		Pf1N1B4_5711	0.39	+2.2
150,374	+		Pf1N1B4_5711	0.39	-1.4
150,385	+		Pf1N1B4_5711	0.40	-1.9
150,489	+				+2.8