Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5675

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
112,064	+				+0.4
112,614	+		Pf1N1B4_5674	0.74	-1.7
112,614	+		Pf1N1B4_5674	0.74	-0.7
112,615	-				+0.4
112,615	-		Pf1N1B4_5674	0.74	+0.2
112,663	+		Pf1N1B4_5674	0.79	-0.9
112,663	+		Pf1N1B4_5674	0.79	-0.9
112,788	+				-0.9
112,788	+				+0.0
112,788	+				+1.3
112,788	+				-0.7
112,815	+				-1.3
112,816	-				-1.6
112,830	+				+0.0
112,830	+				+0.4
112,890	+				-0.1
112,891	-				+0.4
112,891	-				-1.0
113,055	+				-0.9
113,056	-				-0.0
113,056	-				+0.0
113,056	-				+0.4
113,142	+		Pf1N1B4_5675	0.38	-0.7
113,143	-		Pf1N1B4_5675	0.38	-1.6
113,143	-		Pf1N1B4_5675	0.38	-0.3
113,228	-		Pf1N1B4_5675	0.71	-1.3
113,356	-				-0.5
113,360	-				-0.0
113,406	-				-0.2
113,551	+		Pf1N1B4_5676	0.57	+0.0
113,552	-		Pf1N1B4_5676	0.58	+1.7
113,848	+				-0.6
113,849	-				-0.6