Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5554

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
326,202	+				+1.1
326,203	-				-0.9
326,203	-				+2.1
326,213	-				-0.3
326,240	-				+1.1
326,285	-				-0.7
326,286	+				+1.1
326,287	-				-0.5
326,294	+				+1.6
326,294	+				-0.5
326,301	-				+0.1
326,347	-				+0.6
326,435	-				+0.1
326,473	-				+0.7
326,507	-				-0.7
326,507	-				-0.2
326,540	+				+0.1
326,599	+				+2.4
326,697	-				+0.5
326,712	-				-0.7
326,771	+				-0.8
326,772	-				-1.5
326,811	-				+1.5
326,811	-				-0.5
326,814	+				+0.3
326,815	-				+0.1
326,815	-				-0.4
326,815	-				-0.7
326,815	-				-1.1
326,815	-				+1.4
326,822	+				-0.9
326,823	-				+0.1
326,823	-				-0.1
326,823	-				+1.1
326,845	+				+0.1
326,845	+				+1.8
326,845	+				+0.1
326,845	+				+1.1
326,845	+				+1.1
326,846	-				-1.2
326,846	-				-1.3
326,846	-				-0.5
326,849	+				-0.2
326,849	+				-1.7
326,850	-				-0.6
326,850	-				-0.3
326,850	-				+0.3
326,850	-				+1.9
326,850	-				-0.9
326,850	-				+0.1
326,992	+				-0.7
327,041	-		Pf1N1B4_5554	0.29	+2.6
327,041	-		Pf1N1B4_5554	0.29	-1.4
327,098	-		Pf1N1B4_5554	0.54	-1.7
327,098	-		Pf1N1B4_5554	0.54	-1.3
327,098	-		Pf1N1B4_5554	0.54	-1.0
327,193	-				-0.4
327,219	-				+0.1
327,219	-				-2.1
327,219	-				+1.1
327,294	-				+1.1
327,294	-				-0.1
327,294	-				-0.3
327,361	-				+1.1
327,392	+				-1.5
327,393	-				+0.3
327,396	-				-0.3
327,396	-				+1.3
327,396	-				-1.7
327,467	+		Pf1N1B4_5555	0.33	+0.7
327,468	-		Pf1N1B4_5555	0.33	-0.3
327,468	-		Pf1N1B4_5555	0.33	-0.1
327,468	-		Pf1N1B4_5555	0.33	+0.3
327,468	-		Pf1N1B4_5555	0.33	+0.3
327,468	-		Pf1N1B4_5555	0.33	-0.7
327,468	-		Pf1N1B4_5555	0.33	-0.5
327,473	+		Pf1N1B4_5555	0.35	+1.6
327,474	-		Pf1N1B4_5555	0.35	+1.1
327,474	-				+1.6
327,530	-		Pf1N1B4_5555	0.55	-0.5
327,580	+		Pf1N1B4_5555	0.73	+1.1
327,581	-		Pf1N1B4_5555	0.73	-0.9
327,581	-		Pf1N1B4_5555	0.73	-1.3
327,581	-		Pf1N1B4_5555	0.73	-1.1
327,601	-		Pf1N1B4_5555	0.80	-0.0
327,601	-		Pf1N1B4_5555	0.80	+0.5
327,608	+		Pf1N1B4_5555	0.82	+0.3
327,609	-		Pf1N1B4_5555	0.83	+0.1
327,805	+				+0.6
327,806	-				-1.5
327,888	-		Pf1N1B4_5556	0.14	-0.4
327,952	+		Pf1N1B4_5556	0.46	+0.6
327,953	-		Pf1N1B4_5556	0.46	+0.1
327,953	-				+0.1
327,953	-		Pf1N1B4_5556	0.46	+1.1
327,993	-		Pf1N1B4_5556	0.67	+0.1
328,144	-				-0.7
328,193	+				-2.3
328,193	+				+1.6
328,193	+				-0.5
328,193	+				-0.1
328,194	-				+0.5
328,194	-				-1.1
328,194	-				-0.1