Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5435

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
174,730	+		Pf1N1B4_5434	0.79	-0.1
174,731	-		Pf1N1B4_5434	0.79	-0.7
174,744	+		Pf1N1B4_5434	0.80	+1.6
174,762	+		Pf1N1B4_5434	0.81	-0.1
174,805	+		Pf1N1B4_5434	0.85	-0.4
174,805	+		Pf1N1B4_5434	0.85	+0.3
174,805	+		Pf1N1B4_5434	0.85	-0.4
174,805	+		Pf1N1B4_5434	0.85	+0.5
174,805	+		Pf1N1B4_5434	0.85	-1.5
174,827	+		Pf1N1B4_5434	0.86	-1.3
174,911	+				+0.1
174,911	+				-0.5
174,911	+				+0.6
174,911	+				+0.1
174,911	+				+1.5
174,912	-				+0.6
174,927	+				+0.5
175,005	+				-1.5
175,005	+				-0.9
175,005	+				+0.4
175,005	+				+2.9
175,050	+				+0.1
175,114	+				-1.2
175,115	-				-1.4
175,148	+				+0.0
175,157	+				-0.9
175,157	+				-1.7
175,157	+				+0.2
175,158	-				+0.1
175,158	-				-0.7
175,173	+				-0.7
175,181	+				-0.2
175,182	-				-0.3
175,312	+				-0.7
175,354	+				-0.7
175,407	+				+0.6
175,407	+				+0.4
175,408	-				+0.7
175,431	-				-0.5
175,613	+				-0.7
175,614	-				+0.1
175,691	+				+0.5
175,751	+		Pf1N1B4_5435	0.14	-1.6
175,751	+		Pf1N1B4_5435	0.14	-0.6
175,968	+				-1.3
176,196	+				-1.3
176,284	+				+0.4
176,402	+				-0.9
176,402	+				-0.5
176,403	-				+0.1
176,438	+				-0.4
176,438	+				+1.1
176,438	+				-0.2
176,533	+				-1.1
176,592	+				+1.1
176,592	+				-0.5
176,592	+				-0.3
176,593	-				-2.1
176,593	-				+0.7
176,593	-				-0.7