Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5292

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
46,256	-				-0.2
46,256	-				-0.2
46,325	+				+0.3
46,326	-				-0.3
46,389	-				-1.1
46,421	+				-0.2
46,422	-				+1.1
46,532	-				-1.2
46,542	+				-0.5
46,574	-				+0.3
46,574	-				+0.2
46,786	+				+0.7
46,786	+				+2.4
46,786	+				-0.2
46,786	+				-1.4
46,786	+				-1.3
46,787	-				+0.2
46,787	-				-0.2
46,787	-				+0.1
46,844	+				-0.7
46,844	+				+0.4
46,845	-				+0.1
46,927	+				-0.2
47,002	+				+0.3
47,002	+				-0.9
47,002	+				-2.6
47,018	+				-0.2
47,019	-				-0.0
47,032	+				-0.3
47,032	+				-0.9
47,032	+				-0.0
47,033	-				+0.3
47,066	+				+0.1
47,204	+				+2.1
47,355	+		Pf1N1B4_5292	0.74	+0.2
47,355	+		Pf1N1B4_5292	0.74	+0.7
47,355	+		Pf1N1B4_5292	0.74	+0.5
47,356	-		Pf1N1B4_5292	0.75	+0.3
47,466	+				+2.7
47,467	-				-0.0
47,568	+				+0.4
47,569	-				+0.1
47,620	+				+1.1
47,620	+				-0.2
47,620	+				+0.1
47,620	+				+2.1
47,620	+				-0.1
47,637	+				+0.5
47,639	+				+0.1
47,639	+				-0.2
47,670	+				+0.1
47,670	+				-0.8
47,670	+				+1.1
47,670	+				+0.1
47,670	+				-0.3
47,670	+				+0.3
47,670	+				+2.8
47,670	+				+1.4
47,670	+				+0.1
48,013	+				+0.1
48,013	+				-1.7
48,013	+				-0.2
48,013	+				-0.7
48,013	+				-0.2
48,013	+				-1.2
48,013	+				-0.7
48,021	+				+0.4
48,021	+				-2.2
48,048	+				-0.9
48,049	-				-1.1
48,049	-				-0.3
48,057	+				+2.1
48,108	+				-0.9
48,108	+				-0.1
48,108	+				+0.9
48,355	+				-1.2
48,369	+				-1.4
48,369	+				+0.3
48,369	+				+3.9
48,369	+				+0.1