Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5124

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
5,699,362	+				-2.7
5,699,386	+				-0.2
5,699,386	+				+0.9
5,699,935	+				-1.0
5,699,935	+				+0.3
5,700,368	+		Pf1N1B4_5124	0.11	-0.8
5,700,410	+				+0.3
5,700,476	+		Pf1N1B4_5124	0.28	-2.7
5,700,476	+		Pf1N1B4_5124	0.28	-1.7
5,700,477	-		Pf1N1B4_5124	0.28	-1.8
5,700,477	-		Pf1N1B4_5124	0.28	+0.7
5,700,526	+		Pf1N1B4_5124	0.36	-1.0
5,700,574	+		Pf1N1B4_5124	0.44	+0.1
5,700,575	-				-0.3
5,700,576	+		Pf1N1B4_5124	0.44	+0.1
5,700,577	-				-0.7
5,700,890	+				-0.6
5,700,891	-				-1.3
5,700,994	+				+0.1
5,700,995	-				-2.3
5,701,045	+				+0.8
5,701,046	-				+0.3
5,701,048	-				-0.0