Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4810

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
5,312,466	+		Pf1N1B4_4809	0.33	+1.3
5,312,466	+		Pf1N1B4_4809	0.33	+0.4
5,313,367	-				+0.3
5,313,381	-				+0.4
5,313,530	+				+0.3
5,313,530	+		Pf1N1B4_4810	0.34	+0.3
5,313,543	-		Pf1N1B4_4810	0.37	+0.5
5,313,563	+		Pf1N1B4_4810	0.42	-0.4
5,313,663	+		Pf1N1B4_4810	0.66	+0.6
5,314,129	-				-0.3
5,314,356	-				+1.3
5,314,379	+				-1.0
5,314,379	+				+0.1
5,314,380	-				+0.9
5,314,380	-				+0.9
5,314,663	-				+0.3
5,314,691	-				-0.9
5,314,693	-				-1.0
5,314,700	-				-0.5
5,314,765	-				+0.3